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11-0378-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7270848 [Map]; Strand: c
      • AT1G20890.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -3525; Region: intergenic
      • AT1G20900.1 - [+] show detail - Predicted AT-hook DNA-binding family protein
        Distance: -1708; Region: intergenic
    Flanking Genome Sequence: 11-0378-1 - 3-prime edge 
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATTA 
    ATGGGTCGGA TCGAGTTTAG TCAGTTCAAT AAATTAAGAT GAATAAGTCA 
    ATAATTATTT GAATGGGTTG ATGCAATTGG TAAGTGTTTT CAGGATTATC 
    GTTTGTTTCC CAAACAATTT TTGTAAATTA AAAGTTTGAT ATCATTTGTA 
    TGAAGATGAT ATATCAAAAA ATTTTTTTAC TAATACATTA CTCATTCTAA 
    ATCAATAAAT TATCAGTGTC TAGTTGTCTT TTTCTGGTAT ATTTTTTTGT 
    CCATGTTANA AAAAGCGTAG TTCTAATTAG TGATTCACCA AATTCGACAT 
    AAGGCAACAA AGTGGAGTAC TTATCAATAA TTTTTGAAAA TATAAAGTAG 
    TAGTATCAAC TAATTTGACA TTTTGATAAT TATCAGCTAG TCTTATCACA 
    TTAATGGATC ATTAACTTTC TCCAAACTTA TCATCAAAAA GGGTCCACTC 
    CGTTTTACGA TATTTAAAGG AGTATACATG GGTAGATC

AT1G20890.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20900.1

Model type
Protein coding
Short Description
Predicted AT-hook DNA-binding family protein
Curator Summary
Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light.
Computational Description
ESCAROLA (ESC); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT1G76500.1); Has 2335 Blast hits to 2120 proteins in 205 species: Archae - 0; Bacteria - 577; Metazoa - 531; Fungi - 95; Plants - 869; Viruses - 15; Other Eukaryotes - 248 (source: NCBI BLink).
Link
InterPro Scan - TAIR