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11-0384-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 333382 [Map]; Strand: w
      • AT3G02000.1 - [+] show detail - Thioredoxin superfamily protein
        Distance: -360; Region: promoter
    Flanking Genome Sequence: 11-0384-1 - 5-prime edge
    GAAGAACAGG CTTTTATCAG AAGGGAGTTG TTGGTAATAG ACGGCTCCGT 
    CTGTCCTTCT TGTCGGCTCT TACCGCTCTC ACCATTAATT TTCTTACCAC
    TTAATTCTCT CTTTTTCTTT CTTTGTATTT TCAGATACAT GATCATAAAG
    TAAGAAACCA TAATTTCCAC GTAGATAAGC TCCTTCAATC TGTACAATAT
    GGATTTTGGC GGGGTTTTTC TTTTATTCCA TTCTACTCTG TAAAATATAT
    AATTCCATAC GACCGAGTAA TCATCAATCC AGCAAATGTG TAATCATCAC
    ATCATAATTT GTTAAGGAGT CAGAATCTTA TGTTTCTTAT CCAGATTAAT
    AGCATCCTCC TTATATATAT AGAAAAAGAA TTATGACTCG AGAATTATGA
    TGTGTACATA TTTTATAAGA ACAGCACCCA TGAATTAATT TGGATGGGTT
    TAATTATAAC AATATTAAAA TTTGAACAAT TTTATATAGA AAAAGTCTGA
    TTTTTTTTTT NTTCAAAGTT AACAAAGTTN GNANTTNGGG ACANGCTTTN
    GGCTNCCACN CTTGNGNCCT TTATANACAA AANGCCTTTT TGGGGNGNNT
    NAGGTTGNAN CNCCCCANTA AATTAANNTT TAAANNGNNA TTNAAANCAA
    NGGATNGTNG GNAAAAAAAA AANTTNATTG GNTTTNNAAT NAN

AT3G02000.1

Model type
Protein coding
Short Description
Thioredoxin superfamily protein
Curator Summary
Roxy1 encodes a glutaredoxin belonging to a subgroup specific to higher plants. It is required for proper petal initiation and organogenesis. It is likely to function in the temporal and spatial expression regulation of AGAMOUS in the first and second whorl. It's function is dependent on the Cysteine 49 residue and its nuclear localization. ROXY1 interacts in vitro and in vivo with members of the TGA family of transcription factors (e.g. TGA2, TGA3, TGA7 and PAN).
Computational Description
ROXY1; CONTAINS InterPro DOMAIN/s: Glutaredoxin-like, plant II (InterPro:IPR011905), Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT5G14070.1); Has 1149 Blast hits to 1147 proteins in 188 species: Archae - 0; Bacteria - 38; Metazoa - 213; Fungi - 109; Plants - 748; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Link
InterPro Scan - TAIR