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11-0395-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2584688 [Map]; Strand: w
      • AT1G08230.2 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-0395-1 - 5-prime edge 
    GCAATAATAG CCATAGCATT AAAGATTCCA AACACTCTAG TTTCTTTATC 
    ACCAACTATA GTATAGTCCT TCTCTTGTGC ATTTGATTTT TTTCCTGATA 
    TTTAACAGAA AACTCACCTT TTAAATGTAA CATTATAAAA GGTTTAAGAA 
    TTAAGAGTAA AGTGGTTTAG TAAAGAAGAG TACCAATGTA GATGGATGCA 
    GCAGCGGCAG AAGCACTGTA GAGGAGGCAG AGGAGGAGAG ACAGTGAGTT 
    GATGTATCGT AGAGAGTGAA AGGATGGGAA TTGTGCCAAA ACCAAAAGTA 
    AGCATCCAAA AATAATCACA AACTCAAAGA GTTTCATTTC CCCATTTGGC 
    TGCACTACCA AGTACATTGC CTTTAGGCAT TGCCCTCCCA AGAGCGCATT 
    GGCAATAACC ACACCATAGC ACACCGCCAT TTGTATTGGT CCAACGTAGT 
    ACCTTCCCCA TTTCGGACCT TATCAAACAC ACCCCAATAA TTGTTAAGAG 
    GAAAACCAAA CTGATCTTAA CTAATCAAAC ATTCGGAACC TGTATTATAC 
    TTTACCTTAT CCTAATTTAA GTTGTATACA GTCCCGAAAA AGTGGGCTAA 
    ATCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2584577 [Map]; Strand: w
      • AT1G08230.2 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 11-0395-1 - 3-prime edge 
    ANNATGAGCC NGTACGTNCG GATCANGGCA CTCANGNCTT GAAANCCACG 
    GTTTGNTTTT GTTTCCATTC TTTGTTTAGA ACACCACTTT AATATTTATT 
    CATCAAAAAC AAAAGGGCAG TCACATGATC GACTACAGTT ATATATATAG 
    AGTATTTGAT ATATGAATAC TATCTTCTTG CAACGCAGGC AACAATATCG 
    GCACCAGTGA AAGGAAAAAT GATGAAAGGG TTGTGTATGT GTTACCTTGT 
    AGTAATAATG ACATTTTTCA CAGTAGCCAT CACAGGATAT TGGGCATTCG 
    GTAATAAAGC CAATGGACTT ATCTTCACCA ATTTCTTAAA TGCCGAGACA 
    AACCATTACT TTGTCCCTAC TTGGTTTATT TTTCTCGTCA ATCTCTTCAC 
    CGTCCTTCAA CTTTCGGCCG TTGCTGTGGT AAATACATAT TTTTTTAAAC 
    GTTTTTTTTT CTCACATTTA TACATNGGNA TTATTTNATT NNATTTTNGT 
    CACATATATA CATTGTTACT AATTTTGAGT TNTGCAGGTN TACCTACAAC 
    CTATAAACGA TNTTTTGGAA AGGGTAATCA GCGATCCAAC AAANAAAGAA 
    TTACCAGC

AT1G08230.2

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Computational Description
Transmembrane amino acid transporter family protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT5G41800.1); Has 2686 Blast hits to 2681 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 558; Fungi - 296; Plants - 1464; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink).
Link
InterPro Scan - TAIR