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11-0400-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 186318 [Map]; Strand: w
      • AT4G00430.1 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: intron3 (CDS)
      • AT4G00430.2 - [+] show detail - plasma membrane intrinsic protein 1;4
        Distance: 0; Region: intron2 (3UTR)
    Flanking Genome Sequence: 11-0400-1 - 3-prime edge 
    NTGNGGANGA NCCTGTCAGT GNACCACNCC GNTNNNNAGG ACAACGCNTG 
    CCNTATAATG NTGGTAAATA ATANNTGTGN TTTTGTNTAA TANCGGTGGC 
    TGTATGNATT GNATCCATTC GNNCCGGACC ACTTTACTTG GAGCAGCCNC 
    NAGCAAATGC TANATGCACT NCTATACGTA ANCTCCAGCA GANCCACTCG 
    GCAAAGAACA GATANACTNT GAGCACANAC NTNNAANACC GCACNGACCA 
    CANTGGGACC NNTANANGTA NCTNTGATTA TCTATCTACA NGATCACNAG 
    CNCGGGNCAG TGTACCAGAG CCTGCTCCAN NAATATGTAT TTGGGATTTC 
    TAATCAGCTT TTGTCTATGT AAAAACTATG TGTTTCTTTT TTCTTCCTAT 
    ACTCGTCTCA GATGCTTTAT GGCAAAGGGT CTCTGAAGTC TAAGGTGATT 
    AGTGCTCCGG TTATTGATGT TTTGAATAGT TTGTTCGACG AATATAAAAT 
    AAACATAGTC AACCCTCATT CTGTATCAAC ATCAAGTTCT CGGGTTGGTT 
    TTGAGAGACA TGATTATGAA GATGATCATG ACTTCNTGGA TGTGGGGGTT 
    GAAGGATTGG CCTNTGNTTA TGACAAGATG GNGAATGAAN AGCTTGACTA 
    TTGNGTACTT GCAAGAAAGN GTTGAAACNC AAGGGGCCAN TNCNTTGGGA 
    AACANAATNN GANGTGTNNN ATACTANAAN CTNANTNNNN TNAGCT

AT4G00430.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
plasma membrane intrinsic protein 1;4 (PIP1;4); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1); Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88; Bacteria - 5147; Metazoa - 1472; Fungi - 442; Plants - 2512; Viruses - 2; Other Eukaryotes - 1039 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00430.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 1;4
Curator Summary
a member of the plasma membrane intrinsic protein subfamily PIP1.
Computational Description
TRANSMEMBRANE PROTEIN C (TMP-C); FUNCTIONS IN: water channel activity; INVOLVED IN: response to water deprivation, transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR