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11-0421-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 5594298 [Map]; Strand: w
      • AT4G08765.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-0421-1 - 3-prime edge
    NAANNNAANN TTANNNNNNN TTTGGAGCTN NNCTCNTTGC TAGCNTCGNC 
    ACGCTGACTN CTGGTTCGAT CGGTCTGATT GCTCTTCTAT AACTACGACT
    NGATCTCGGA TCGAGCAGGC TTGCCTCTGG ATCGATCGAG CTNGTATCTG
    GGAGTAAAAG AAACTCACCC TGTCGACTAG CGATAGTCGA ATTTGGACTG
    TTATAATCAT CTTCTCTTGC TANAGCACTC TCAGAGTAAG GAAAACATTC
    CTCCTATAAA GCAACATTTT GGGAAACAAA AATTCTTTCA GTNTGAAAAT
    NCATCACTAA CCATCCTTTC TTTCGAAATT GATATCCNAG AAAAANACAT
    NGAGCACNTG CGANCTTCAA ATTTGTCATT CGAACGTCTT ACTANNTTTG
    CATNGCAAAG GCNCCCAAAT ANNNTTNTNN NCATTATAAN AAGGAGGATT
    CAGAAATANT ACTTNCNTTG GNGNGANCCC NTTTAAGTAN GATNGAAAGC
    GTNGCGGTCG GATCAAANCG ANGCGCCCCC NGNNTTGCTT TNTNNCCTNC
    ACANGAGTTN GTNNNTNACN CAGNTCCGNG NCNCACACAN ANTNCCCNNN
    GTTNNTGNNN TNTGCNNTNT CTTTCCCCNT NGCCCGGNNN CNCNNANNAG
    NNTGGNNNTN TNNCNCGTTT TCNGNNNGNN CNTNCCGNTC NCNNNNNCCC
    CCNNNCCGTT NCNCTGNNNN TNNCCCNNGC NNGNCTCCGG NCCNNCTNCN
    NTGCATGANG TGNCNNGNTT CCCCACNNCG CNNNNTNTNN TNAANGNNGC
    AANCANACNG CAGCNNNNNG ANCNNCANGG NAATGANACN NGA

AT4G08765.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 5.2e-158 P-value blast match to GB:AAB82754 retrofit (TY1_Copia-element) (Oryza longistaminata)
Link
InterPro Scan - TAIR