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11-0436-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 529680 [Map]; Strand: c
      • AT1G02530.1 - [+] show detail - P-glycoprotein 12
        Distance: -115; Region: promoter
    Flanking Genome Sequence: 11-0436-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT CCCCCACTTG TGATTTCTAT TAAATTTTAC 
    CTGAGAGTTC ACAGAAATTA TCACCATAAA AGCCCATGGG CTAAATTTAA 
    ATTTATTTTT TTCTTTTGAC AAATTTATAA TATTATGTTT ATTAATGCTG 
    AACAAAAAAA TAATTAAAAT ACTAATATGT AATATTAGAT TAGTAGTTAA 
    GTATAAAGAT TTAGTGAAAA TAAAATAAGA TTAAACAAAA ATGAAATTAG 
    TCAAATTTAT ATTAGTTACA AAGTTGTATA GTTTTACACT TTGATTTGTA 
    AGTCAATTTT ATATTAGTAA CAAAGTTTTA TAGTTTTACA CTTTGATTTG 
    TAGTTGCTCG GCAATGAATA AGATTCTTTT TTTTATACAC TTTTAATTAA 
    TCGTAAAGAC GTAAACATAA TTAGTTAAGA GAAAGAAGGA GAATTTAAGA 
    CTGACAGATG GAGAGACAAG AGTTGTTGTA GTTATTAAAG AAGTAAATNG 
    TGATTTATAA TAGTAATCGG ATGAAACAGA TTATGTTAAT TAAAGGGAAA 
    AGGAGTCCCC ATGCTTAAAT GCTTTNGGGC TTTGGGTTAC TCGTATANTC 
    NGAGATNNNN TTNNNAAAGG AAACANGTTN NAACANACAA TNTTAAANGG 
    NCCNTGAAGA CAATTCCGNN GATNATTTAC ANAAATAACA GNCNGGNAGG 
    ATNTNNTTT

AT1G02530.1

Model type
Protein coding
Short Description
P-glycoprotein 12
Computational Description
P-glycoprotein 12 (PGP12); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 834511 Blast hits to 387558 proteins in 4042 species: Archae - 14726; Bacteria - 649276; Metazoa - 18491; Fungi - 13092; Plants - 9791; Viruses - 35; Other Eukaryotes - 129100 (source: NCBI BLink).
Link
InterPro Scan - TAIR