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11-0438-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29977160 [Map]; Strand: w
      • AT1G79670.1 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon3 (CDS)
      • AT1G79670.2 - [+] show detail - Wall-associated kinase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 11-0438-1 - 5-prime edge 
    CTCATATTTG GTCGTTTCTT CCCTTTTAGA CTTAAACACC TTCTGGCAAG 
    TTTCGCCACA GCCAACACTT GTTCCAACGT GCAACCTTCT TTGATCCGAG 
    AATCAACAAT ATCAAGAACT CTGTTCTGTT TCATAGCCTC ATTGAAATGA 
    GACACAAGTC CTCTGTTTTC TTCGGGCCGC ATTACAGAAA ACGGCTTTTC 
    TCCAGTTATG AGCTCAACCA AGACGACCCC AAAACTATAA ACATCACTTT 
    TATCCGTAAA CTGGCTAGTT TGAAAGTACT CTGGATC

AT1G79670.1

Model type
Protein coding
Short Description
Wall-associated kinase family protein
Curator Summary
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.
Computational Description
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120817 Blast hits to 119164 proteins in 4285 species: Archae - 142; Bacteria - 13548; Metazoa - 44699; Fungi - 10352; Plants - 33861; Viruses - 488; Other Eukaryotes - 17727 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79670.2

Model type
Protein coding
Short Description
Wall-associated kinase family protein
Curator Summary
Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.
Computational Description
RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system, integral to membrane, cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 2 (TAIR:AT1G16130.1); Has 120550 Blast hits to 118930 proteins in 4262 species: Archae - 142; Bacteria - 13516; Metazoa - 44650; Fungi - 10334; Plants - 33695; Viruses - 488; Other Eukaryotes - 17725 (source: NCBI BLink).
Link
InterPro Scan - TAIR