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11-0440-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1246427 [Map]; Strand: c
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 368; Region: intergenic
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 301; Region: intergenic
    Flanking Genome Sequence: 11-0440-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTG 
    TTCCGTTTCG CCAGATACAG GGTTTGCGTC AGCACCAAAT GTTGATTCTT 
    GGTAAAAAGT ATGAATTTTT GGTTTTGTTT CCAACATTTT ATTGTGATTG 
    TGGAAAGTTT TCTGAAGCCC GGAAAGTGTT TGATAACATG CCTAGGAGAA 
    GAAACNGTAG ATTCGTCGAA CCTTATGATT TCGATGTGGA GTTTTATAGA 
    ATGGTTGGTT AACACATGCA AATTGAAGCA TTGTTTCTTC ATATGTATGT 
    ACCCCAATGT AGGAGCCTAG CTTTTCCAAG AAAAAAAAGT ATCGGAACAT 
    GATTCGTTTT CGAACATATC CAAATAGGAT GATATCGCAG GAAAGAGAGA 
    AAAAGGAAAA TCTCAGTATA TAGACAAAGT ATACATCCTT CGCTATACAC 
    AACTATTCTA ATTTGTGATG TAACTATACT TTACACTACC TTTGTGCTTC 
    TTCTGACTCT CTTTCCCGTC GGTAAGTAAC ACTTTCTTTA TCGACTACTC 
    TCCCGACTCG TCTGTTTCTC CTGCTTCTCT TACTAATACC TCTCTTGCCT 
    TCTTTCTCAA TCACAGGTTC TGACATTGGC ACAAGGTGCA TGAAGCATAA 
    AGGTGCCAAA GCTGCTAGAG ACTGTATGAG AATCCCTGAA GACAAGTTTG 
    AATAGTTACT TGATGTTATA CCGATCAGAT TAGCCAATCC GACGCCTAAN 
    AATGCACTAC CTATTTGTGA TANACACAA

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR