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11-0452-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 54709 [Map]; Strand: c
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -1260; Region: intergenic
      • AT4G00150.1 - [+] show detail - GRAS family transcription factor
        Distance: 2490; Region: intergenic
    Flanking Genome Sequence: 11-0452-1 - 5-prime edge 
    ACCATATCTG CTCCTCAACC TCTCACTTTA CAAGTACTTC ATTTATTTTC 
    TTAGTTAGTC TATTTATTTC AATAAACAAA CTCTACTCAA GTTCATCAAG 
    ATTCGTAACA GTGGAATCCT TTATTAATGT TAGATCATCA AACTCTACAC 
    ATGTTTATTT CCATCTCTAT GCATGCCTTT ATATTGCTTA AGTTGTATAC 
    ACGTACATAT ACACTTCACT ACTCTTATTA TCTAGTTCCA TATTACGCTA 
    TATATTTATG AATTTATATA CATAGACCAT ACTCATGTCC TTGAAAATCA 
    GTTACATGTT TCTTTTGTTC TTATCTTTAG TCTTTTGTGT TTTCTCTTTT 
    GGCCTTTTTT CTTCCTTTAT CTATTTACAA GTCAAGTCAG CTTATTAACA 
    ACGCGGTATT TCCATCCCCA CAAAATCTTC TTATGGCTAC TTTTATATAT 
    ATATACATAT CAAACTATAC TGACGACAAA ATAAATAAAT TAAGAAAAAA 
    AAAAAAAAAA AGGGGGGGNG GGCCANNCAT TATTTNACNA ANANCACNTT 
    NNANACCATT NGAATGGGNC NCTNTCCTNC CNGGNNNGGA NNNTNTNNAC 
    NGAAGGGGGG GAAACTTTTT TATTTNGGNN GGGGGGGNNN CCCANNNNGG 
    GNGGGANAAA ANAATNGGGT TNAAAANAAA NNNNNGNAAN TTNCCCNNNA 
    AAACANNNNA ACTT

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00150.1

Model type
Protein coding
Short Description
GRAS family transcription factor
Computational Description
HAIRY MERISTEM 3 (HAM3); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT2G45160.1); Has 2283 Blast hits to 2233 proteins in 293 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2281; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR