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11-0459-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7140092 [Map]; Strand: w
      • AT1G20610.1 - [+] show detail - Cyclin B2;3
        Distance: -2311; Region: intergenic
      • AT1G20620.1 - [+] show detail - catalase 3
        Distance: -2975; Region: intergenic
    Flanking Genome Sequence: 11-0459-1 - 3-prime edge
    ATTACACCTT ATCCTTTCTT TCTTTCTTTT TGNATTTCGA ATTTTGTCAA 
    TGGAGTTGAA AAATCAAAGA GAAGGACAAA GCT
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7140208 [Map]; Strand: w
      • AT1G20610.1 - [+] show detail - Cyclin B2;3
        Distance: -2427; Region: intergenic
      • AT1G20620.1 - [+] show detail - catalase 3
        Distance: -2859; Region: intergenic
    Flanking Genome Sequence: 11-0459-1 - 5-prime edge
    GGTGTAATCC CGTTTTNTGT CGTGTNGAAC CACCAANACG AANNNTCATT 
    GGTTGGGTCA ACACCAAAAA GTTACTAAGC AAGGGTAAGA TTTCTACGTG
    GCAGCCTGTA AGTGGTTCTC AGTTGCCCTC GTTTATGATA TGATAATTTA
    GTAGTATAGC CCGTGAAGTA ATTTGCCTAA ACATTATCGT CAACGTTCAT
    TATCTATATT TACTTTTTAC TTTTGAAATG TAAAAATAAA AATTTACGTT
    GTTTTAATTG ACTCACAATT TTACCACGAT AAAATCTTAG AGTGTTACGT
    GTTATATTAT GTACTGTATA TAAAAACTAT GTATATATGT ATGATATAGT
    ATTGGTAACC CTCTATTTAT TTAGTTTGGA CACCTCAAGA AAATATTGGG
    TGTGAAGTAG TTGATATCCT ATGTCAGTAT TAATTAAGCA GTAGTTTCTC
    GCATGGAGCT ATGCTGTTTT TTTTTTTTTN NNNCTNANNN TTTNCNTTNA
    AAAANNGNNC GNNTTNTTCT NNTNGTNAAA AAAANCCNNN CCNANCGGNG
    AAAAAAAATT NCGGNNNATT NGGTTTTTNC CCCCCCCCTT TTNTTNCCNA
    AGNNAACNCA CCCCNCCACA AAAAAAAAAA NNAAAAACCC NCCCCCCNCT
    TTTTTTTTTT GGTAAAAAGG NGNCNACNNA NNCATTTTNN TTNTTTTTTT
    TNT

AT1G20610.1

Model type
Protein coding
Short Description
Cyclin B2;3
Computational Description
Cyclin B2;3 (CYCB2;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B2;4 (TAIR:AT1G76310.1); Has 4405 Blast hits to 4396 proteins in 374 species: Archae - 0; Bacteria - 7; Metazoa - 2039; Fungi - 549; Plants - 1150; Viruses - 30; Other Eukaryotes - 630 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20620.1

Model type
Protein coding
Short Description
catalase 3
Curator Summary
Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.
Computational Description
catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 11 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6176 Blast hits to 6156 proteins in 1860 species: Archae - 22; Bacteria - 4351; Metazoa - 678; Fungi - 546; Plants - 456; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link
InterPro Scan - TAIR