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11-0461-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19307111 [Map]; Strand: c
      • AT2G46990.1 - [+] show detail - indole-3-acetic acid inducible 20
        Distance: -744; Region: promoter
    Flanking Genome Sequence: 11-0461-1 - 5-prime edge 
    GTTGTGGACC CATCATATGT ATGCAAGCAT GACAAATGTT TGAGCCTACG 
    ATGATTCAAG TCCAAGTCAT TATTAACCAT AAAACAATGC GATTTAGTTC 
    CACCAGATGA TTTGAATAAT CAAAACCCCC AATAAGTAAG TCTTAGACCG 
    ATTTTATTTC ATGTAAAAAG AAGATAAATC TCATTTTTGT TTCTTTACAA 
    TTACGTTTAT TCGAAGCT

AT2G46990.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 20
Curator Summary
Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA20 lacks the conserved degron (domain II) found in many family members, and IAA20 fusion proteins are stable in Arabidopsis seedlings. IAA20 transcripts are induced by auxin treatment, and overexpression of IAA20 leads to defects in gravitropism, root development, root meristem maintenance, etiolation, and cotyledon vascular development.
Computational Description
indole-3-acetic acid inducible 20 (IAA20); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 30 (TAIR:AT3G62100.1); Has 1768 Blast hits to 1768 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1767; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR