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Mutant Lines
11-0472-1

11-0472-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 3532355 [Map]; Strand: w
- AT5G11100.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
  Distance: -47; Region: promoter

CGNTGATNAA CTAACAAAAT CGGCNTATNC GANAACANGT NAGGACCCGG 
ATTCTNCNAT CCTACTTGNN TCACCTGGGA ANGCNAGGAG NCCANGNCAA 
NTANACCACG CANTNCCCTG CNNNGGNCGT CNACNACNNN TGATCTNTAG 
GGGNNGGCCG NCAACGAATC CATCANNNAG CTAAGTCANG ATNNGCAGGA 
ATCANTTCGG CTGGCCCNAA CCGAACAGGA TCACCAGANN NGGCCGTNTA 
GCGANCAAGC CNTATAAGAA GATTAATAAA TAAGAAGAAC AATTTTTTGG 
TTTTGAATAG GCAAAGACCA TTGCTGCATT TGCAAGAATG ACAGTTCAAG 
ATTCGAGAAA ACTTCTCCCG GGAGATTTTT ATCCTTCTTG GGTTGTGTTT 
TCTCAGAGAC AAAAGTTGAG TTATTCTAAA TGTCTNGNAC TTTCATCATT 
NNGTTCTGTC TTTTGCTCTT GTTGATGNAN NGATACTTGA NCTTGATTAA 
ACTACAGTTA AATNGGNTNA ATNNTGAACT NGAAAAGATC TGGCCTTATG 
TNACATGAGG NNACTTTAAT TAACACGCAN TGGTACNTTN TNTATTTANC 
CTTNNGGGNT GGGNNGAGCA TANNNAACAT AAAGNNANAN AGCCGGANGG 
TGAANCNTGA ANNNNAAGCG NCNGNNNTTA NATNGANANG GAGGTGGAGA 
ANCNAGNGAC GTTGNACNTN NNCAACNGNN NCNGNNAGAN GNNTCCNTAA 
NGGTNCGNGG AANGAGGAAC NNTNGGGCAN ANGGNANNNA NGNTTNANCN 
GNNAANANGG TGTAGANGGG ANNAAAAAAN NCAG

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 3532324 [Map]; Strand: w
  - AT5G11100.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
    Distance: -78; Region: promoter
Flanking Genome Sequence: 11-0472-1 - 3-prime edge
```
GAACCAGGGA CGAGAGACAC GGTGATTTTT TAGATGAGAT CCATTCATCG 
GAACAGAGAG TGCTCTGCTT CGAGATTAAT TAGTAATTCG ACAATAAAGG 
CTAAAGACGA GATTGCTTCA AGCT
```

AT5G11100.1

Model type: Protein coding
Short Description: Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description: SYTD; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G05500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR