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Mutant Lines
11-0474-1

11-0474-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 23221408 [Map]; Strand: c
  - AT5G57330.1 - [+] show detail - Galactose mutarotase-like superfamily protein
    Distance: 319; Region: intergenic
  - AT5G57340.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
    Distance: -4678; Region: intergenic
Flanking Genome Sequence: 11-0474-1 - 5-prime edge
```
GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA TATCAAACCA TTAACTTTTG TAACTACACT 
ATCAATCTTT TTTTTTAAAT GCTAATCTTG AAGTTAATGC TCATTTGTTA 
TCATTTANAC AAAGNGGGTG TATCAACTCA GGACAGAGAC ATCGATTATA 
ACTATTATCC TACTCGAGGT AAGATACGAA AACGGAAAAA TCATGGTTTC 
TTANATCCTG ATCANATTTT GAGATCTTAA AAGGACTAGT CCTCTGGGTC 
ANAATT
```
3 prime edge [+] show sequence
1. Chromosome: 5; Position: 23221462 [Map]; Strand: c
  - AT5G57330.1 - [+] show detail - Galactose mutarotase-like superfamily protein
    Distance: 373; Region: intergenic
  - AT5G57340.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
    Distance: -4624; Region: intergenic
Flanking Genome Sequence: 11-0474-1 - 3-prime edge
```
TGGACATCAA TAATGGAAGT GCCCATAATA ATTGATAAGT AACTTAACTA 
ACTCGAGATC AAGTACAAGA TCAAAAGGAC GATAATAGAC CAACGTGGGA 
TATTTACAAT TTACATCTCT AACAAAGATG CTACTGTTTT GTGAAAACGA 
AAATTCATTA ATAATAAAAT AAGGGCATTA TTTTGGATC
```

AT5G57330.1

Model type: Protein coding
Short Description: Galactose mutarotase-like superfamily protein
Computational Description: Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink).
Link: InterPro Scan - TAIR