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11-0481-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1321899 [Map]; Strand: c
      • AT1G04710.1 - [+] show detail - peroxisomal 3-ketoacyl-CoA thiolase 4
        Distance: -5; Region: promoter
    Flanking Genome Sequence: 11-0481-1 - 5-prime edge 
    NNNNCTGNNG CNNTGACTCC ATGGTTTATN CAATGNTAAT NAACACNCCN 
    NACNTGGGCC AACCNAGTGN AANCGCNNAN NAANTACCAG ACNAGGGGAA 
    NNAAAACACA CNCAATNCCC TTATATCCCG GTTNAGGATG GGTTACATAC 
    ATATNCGGTT TCAGGGTTTA NCGGGAATCA ATCATCTGGT TTNGATGCTA 
    AACNACGGTC GNNTANAGTA ANATGTCTTT CTTTCTNTCT CAAAAAAACT 
    NNACAGTNNT TTNTTCAACG GCCCGTTTCT NTTATNAATT AACCCTAAAA 
    ACNCCGTNTN AGTCTNTNTT NNANCCTACT TTCAAATTCN AAACTTTCGT 
    TNATNNGTTN TNTACNTAAG NCTTTGCTTT CTTTTTTTCC NTGCANGNNG 
    TNGNTCCTTT NNGGTTATNN CTCNNNAANG TTNATGGAAA ATTTTTCNGT 
    TTTTNATTTC CAGTGGATTA TGATNGGNCC TTNATNAAAN TTAAGGNGCT 
    TGGGACTGNT TCNTGNTNGG NNTAATCNGT GGANNNGNGT CNNNAANTCN 
    ANTNGTNNTA ATAATNNANT NTACATATTG CTTANNTNTN TTAANNCNNC 
    ANANANNNNN NGNNNNAANN TNANNCGNGN ANATGTTTCT TNAATNTCAA 
    TTCANCGTAN GNCTTGNAAG CCANCNATNT ACNNANCTNC AACANGGGCA 
    CANCNAAATN GAAGAATNTT ATGNNNGCNC AAGAAAATGG GACCGTGATG 
    TCGATTN

AT1G04710.1

Model type
Protein coding
Short Description
peroxisomal 3-ketoacyl-CoA thiolase 4
Curator Summary
EC2.3.1.16 thiolase.
Computational Description
peroxisomal 3-ketoacyl-CoA thiolase 4 (PKT4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acetyl-CoA C-acyltransferase activity; INVOLVED IN: catechol catabolic process, ortho-cleavage, protocatechuate catabolic process, ortho-cleavage, metabolic process, fatty acid oxidation; LOCATED IN: peroxisome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 3 (TAIR:AT2G33150.1); Has 22406 Blast hits to 22392 proteins in 2262 species: Archae - 405; Bacteria - 14105; Metazoa - 1004; Fungi - 662; Plants - 281; Viruses - 0; Other Eukaryotes - 5949 (source: NCBI BLink).
Link
InterPro Scan - TAIR