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11-0484-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1093015 [Map]; Strand: c
      • AT4G02485.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-0484-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAAGAA 
    TCTATTAACC AGGTACTAGA ACTCTCAAAA TTTCGTTTCT CTTCTTCCCA 
    AAGATGTGGA GGCAATGCTT TAGAAATCTT TTAGCTTATC CTTTGCTGAG 
    ATATCTTTTC TTTTCTCTTC TTGTCCCCAA CTTGTTATAA ACTACNTGGA 
    TTTCAAACTC TCAAACCTTG TTTGGTTGTT TCTGTGGTAA TTATTTGATT 
    GCATTAATAA GAGATTGATC CAAAATTCTT AGATTGGTGT ATGAATGAGT 
    GAACATCATC GTTTCCTAGG CGGCTTTTGT TTCCTCTTGA AGTGAGACTC 
    GATTCTGTTC ATTTCTATTG TTTTCTTATT AAATTTGGTA ACAAATACTT 
    GCATGAATAA CCCAGATTCA TGGTTATTAG GTGTCATCTT GCTTGGTGTT 
    AAGTTGAGAT GATACGAAAT AAACTAAAGC T

AT4G02485.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G31600.2); Has 487 Blast hits to 486 proteins in 165 species: Archae - 0; Bacteria - 93; Metazoa - 167; Fungi - 38; Plants - 88; Viruses - 3; Other Eukaryotes - 98 (source: NCBI BLink).
Link
InterPro Scan - TAIR