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11-0486-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1321082 [Map]; Strand: w
      • AT1G04710.1 - [+] show detail - peroxisomal 3-ketoacyl-CoA thiolase 4
        Distance: -822; Region: promoter
    Flanking Genome Sequence: 11-0486-1 - 3-prime edge 
    ACCACGACAT GAGGTGGTAC TATATAGGTC AGGGCTGATT ATTCTACAAG 
    ATAGATTACA ATTTACTTAA ACGGTCTCGT TAGGGCGTTT GAGAACAACA 
    TGATTAACGT TGAAGAGCGC GTTTCATAAA TTGCTTGGAT TTGAAATAAT 
    TTGAGAAGAT GAGTTAAGTG AGGCGCGTTT GAGAACAACA ATGGAGAACG 
    TTGCAATTTA TGGGCTGAGT TTTAATGGGT TGGGCTTATT ACTCCAACAT 
    ATTGCTTTAC ATAAAAAAAA GTTGTGTTTT TTTACACAAT TGACCCTCAA 
    CTTTCTTGGT ATACAACTTT TACCTAAACC GGTAAATGCT TCTCAATACT 
    AATTTACAGA CTCCACACAA TCTCATAAAT CTATATTCTT CCCATCTTCT 
    GCTTTCATTC AACCAATAAA TTTAAAACCA ACCCAAAAAA AGGCTCATGT 
    ATCTCACAAC TTACGTTTAT TTGANAGGGC TTTTAGGTTC TTCGCTTGGG 
    TTGCAAGGCA ACAGTCATTG ATCGAAGTCG TTCAACAATC TCCGTAAACG 
    ATGGCCGTAC TCCTGGATCG AATGACCAGC ATTGCTCCAT CAACTTCCTC 
    CACTCANCTT CACACCGTTC AGGCACCGGA GGTCTTAACG TATTGTTCAC 
    AATTCCACCT TTTTATCAAA NCCAAACAGA TCAAAANTTA NATCATAANC 
    CAAAGCTCAN TCCAAGTTCA TCTTGTTCAA AGAC

AT1G04710.1

Model type
Protein coding
Short Description
peroxisomal 3-ketoacyl-CoA thiolase 4
Curator Summary
EC2.3.1.16 thiolase.
Computational Description
peroxisomal 3-ketoacyl-CoA thiolase 4 (PKT4); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acetyl-CoA C-acyltransferase activity; INVOLVED IN: catechol catabolic process, ortho-cleavage, protocatechuate catabolic process, ortho-cleavage, metabolic process, fatty acid oxidation; LOCATED IN: peroxisome, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase (InterPro:IPR002155), Thiolase, active site (InterPro:IPR020610), Thiolase, N-terminal (InterPro:IPR020616), Thiolase, conserved site (InterPro:IPR020613), Thiolase, C-terminal (InterPro:IPR020617), Thiolase-like, subgroup (InterPro:IPR016038), Thiolase-like (InterPro:IPR016039), Thiolase, acyl-enzyme intermediate active site (InterPro:IPR020615); BEST Arabidopsis thaliana protein match is: peroxisomal 3-ketoacyl-CoA thiolase 3 (TAIR:AT2G33150.1); Has 22406 Blast hits to 22392 proteins in 2262 species: Archae - 405; Bacteria - 14105; Metazoa - 1004; Fungi - 662; Plants - 281; Viruses - 0; Other Eukaryotes - 5949 (source: NCBI BLink).
Link
InterPro Scan - TAIR