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11-0488-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5084990 [Map]; Strand: c
      • AT3G15110.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT3G15111.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -870; Region: promoter
    Flanking Genome Sequence: 11-0488-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TCCAAGTATC ATCATGGTCT CAATAACTGT
    AAATGCCCAT AATTGAGAAA TAGCTATATT CATTATGGAG AGGACCCATT
    CTTGTCCATG ATTTCTGAAT T
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5084996 [Map]; Strand: c
      • AT3G15110.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT3G15111.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -864; Region: promoter
    Flanking Genome Sequence: 11-0488-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACAAGGTACT GTTACTTTAC CAAAGCAAGT TAGACAGAAA CAGCAACTTT
    GACACAAGCA ATGGATGATC AAAAAGAGAG AGAGAAGAAA CGAACCGAGA
    AGTTATCAGA GATAGTCTGA CGATTGAGTC CTGATTCAAC TGTAACAGTG
    AATTTGTAAA GAATGAGAGC AATGACTCCT GCGGCTATCG CACCAAGAAA
    CGCCTGAGCC GCCGATGGAG TTGAATTACC ACCTTCTATC GGAGTTGAAC
    TTAACGCTTT TAGATTATCC ATTGCTTCTT CTTTCAACGA TTTCTTAGCT
    CCAGTAGATC TAAATGTCTA CAATTCCACA CCAAATCACT CATATTCCTT
    CCCAAATTTC AAACACAATT CTCCCAAATT CAAGTGTAAC AGATCAAAAC
    CATTGGTTAA ATTCGATTTA GACCAAATTC GGTGGTTATT TGTTCCTTAA
    GAATGTCTAG GGTCTAAGTA ACGAGATATT ACCAGCTCTT TGGCGCGTTT
    AGCGCGCCGT CGAACGGAGC GGATGAGGAA GACAGTGATG GCACCGGTAA
    GAAGCACACT GGTGGCCAAT TGGAGAGGAG TAGGATCATC GGAAGTGGCG
    AAAATGGAGT TAGTAGACGA AAACGGAGAC GTGGACGACG TAGGAAGCTC
    AATTGGACCA TCTTCTTNCA CCTNCGCCAC ATCGGCGATT TCTTTTACGG
    CGGATAATCG GATTATACCG GGACGGATCA CCAG

AT3G15110.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G15111.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR