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11-0511-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 287056 [Map]; Strand: c
      • AT5G01747.1 - [+] show detail - MIR164/MIR164B; miRNA
        Distance: -530; Region: promoter
    Flanking Genome Sequence: 11-0511-1 - 5-prime edge
    CCCACAATGA AACCTAANTA TACATCAAAA AGATAATGGA GACAGCATGC 
    TGACCCATGA ACATGCTACC CAAAAACCTC TAAAGAAAGT GAATGTGTGT
    GTGTGTGTTT GCGTATATGC ACACACATTT TTATAATAAT GTTCTTGAGG
    ACCACAAGAC CACACCGATG TACAATTTAG GTTGCATATG CTATAGATAA
    TACGAATCTC CTCCGTATAT ATATGTTTTT TTAATGTATA TCTCAATTTA
    ATATATGCAG TTTCTTTTGA TAATTACTTG TTTTGAACTA ATTGTANCCG
    TGTGAACATA AGAAACTAAT TGTANCCGAT TGTTCAATGA AAAAAAAGTG
    AGGTAAAAAT NGGAATTATA ATTAGGTAGA GTTTTTAATA TTTCTCTACA
    TATAGANAAA TATTTCTGGN GAAATCATTA AANAGTNCCA TCCCACAGCA
    TNAATGACTT TTNTTTTTTC NACTTTAAGG TAGGACTTGA NAAAAATCAT
    GCGGGCGNAN TNTNGCATTA CATNAAANNC CATNCCCTTT NNCCTTTNAT
    NTAATGTTTA TCCNANCTAA NNANTTTTTT TNTTTTTTTN NGNAAATNNG
    NNCCGTTNTT TNTTTTTCAA NTTCGGAAAA NATGGGANNT TATTTNCNTN
    NTNNTTNTTN TNAAAAATTA NCGTCCGTCG ATANANNNNN GGGCCCTTNG
    NNANNNNANT

AT5G01747.1

Model type
miRNA
Short Description
MIR164/MIR164B; miRNA
Curator Summary
Encodes a microRNA that targets several genes containing NAC domains including NAC1. Overexpression leads to decreased NAC1 mRNA and reduced lateral roots. Loss of function mutants have increased NAC1 and increased number of lateral roots. Also targets ORE1 to negatively regulate the timing of leaf senescence. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage.Mature sequence: UGGAGAAGCAGGGCACGUGCA
Link
InterPro Scan - TAIR