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Mutant Lines
11-0518-1

11-0518-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 13758 [Map]; Strand: c
  - AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
    Distance: -399; Region: promoter
  - AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: exon1 (CDS)
  - AT4G00040.1 - [+] show detail - Chalcone and stilbene synthase family protein
    Distance: -869; Region: promoter
Flanking Genome Sequence: 11-0518-1 - 3-prime edge
```
GATCGAGGTC TGAGAACCCA GAAAGACCCC AAGAAGCGAG ATGAAATCGT 
GAACGCCATC GAATCCATGA CGGTTATCGG GCGCAGCTCC ATCACCACAG 
ACGACTCTCT ATCTGCTACG TGGCGGCTCT TGTGGACGAC NGGAGAAGGA 
ACAGTTGTTC ATCATAGAAA AGGCAGGCTT GTTTGGGACG ACCGCCGGAG 
ACGTTTTGCA GGTGATCGAT GTGAATAAAC GGATC
```

5 prime edge [+] show sequence

Chromosome: 4; Position: 13642 [Map]; Strand: c
- AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: -283; Region: promoter
- AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G00040.1 - [+] show detail - Chalcone and stilbene synthase family protein
  Distance: -985; Region: promoter

NCTCAATCCT CCTCAGAGAT CAGGGTCAAN CAGNTTCCTC TTGGCTNNCT 
GNGCTGGATT CANGAAAAGC GNCCAGCGTN GNNNGAAAAC CNGCNCNACG 
GAGTGCCGGC GGAGNGGANG ANAACATGCC GACAGCTGAG AGCGCGAGCG 
CCATGTTTGC AAATTGCAAT TTCCATGGTT AGGTTGTTGC ACGAAGAAGA 
AGAAGAGATA CTCTGTTATT TGGGTTTCTT TTCTAAAAAG CCCATTTGGG 
TTTTATTTGC TTTATCTCAT GAGTCTAAGC CCAAGCCCAA GGAAATAGCT 
TGCACGTGCG CGTCACGTGT CTACGATAAA ACCCCAGCAA CGGCGAGCGG 
CTTTGCCTTG CTCATTCAAC CTCGCTCGTC GTCGTCGTCG TCTCCACTTC 
GATTTTTCAA TCAGTAATAT TGGTGGTTCA GAGATGATGA TGATGAATCT 
TTTNAGGAGA TCAGCGATAG CCATCGGCCG CCAATCAAAA ATCGAAACTG 
GCGTCNGTTT TCCTCCGCTA CACAACCTTG TTCCAGGAAT CCCAAAATCG 
GTAAGGCTTT CGTATTCCNA TTCTNACTTT GCCGGCATTT TNTATATAAT 
ATTGNGCTAA AAGCTTTTGG GCTNTTTCNA CTAACATTAG ACCCGNTATT 
GATTAANGAN CTTGGGGAAA ATTAGACGGC CGTTTTTTAA AAGGATNTAT 
ANACCNTGGT TNNAANNGAA TNNT

AT4G00026.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00030.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00040.1

Model type: Protein coding
Short Description: Chalcone and stilbene synthase family protein
Computational Description: Chalcone and stilbene synthase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT1G02050.1); Has 5683 Blast hits to 5679 proteins in 1391 species: Archae - 0; Bacteria - 1882; Metazoa - 0; Fungi - 67; Plants - 3528; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Link: InterPro Scan - TAIR