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11-0523-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24091094 [Map]; Strand: w
      • AT5G59790.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0523-1 - 5-prime edge 
    GTCNAAACCN TCANCCGGAC ATGGGCTGNA CCACNNTNAA AGCANNATNT 
    CANCCCGTAA ANATCCAAGG CATCNTTAGT NTGNNGGANA ANGGNCCCGN 
    GNNCCACTGA CNANTNTGNT CCCATGTCAC TCTCTCTTCC CACNGATGGT 
    CTTTATCTCA AAGGTAATAA TAAATCAACC CAAAAACTGA TGAAAACGCT 
    TTTTCAAGAA AGTAGCTTTT TGAGTTCAAA AGGTTTTCAA ACTCTCTGTT 
    CTCTTTGGCT TTTTACTCTT TATTATTTCT GAAACATAAC AGTGAAAAAG 
    GCGGCAAGTT TTCGAATTGT ATCTTTATTT CAAAATCAAG AACTTCATTG 
    AGCAACTAAA AAAGTTTAAA ACTTTAATTT GGTTTTTTCC AAATTCTCAG 
    ATGTGATAAA CCGCTTGAAT GATCTAAGAG GGAAAGGCAT GGCAAGTCTC 
    TACTCTTGGT CTTCGAAACG GTAAACNGAT TTTCCTCCAC CGATCGGATC 
    TCGATAAAAG CCCTCNTTCC TTTTNAAAAT CTTCTTNACN TTTTTTNTNT 
    TGTTTAGGGA AGCTCCATNA ANTGGATTAC GTCTCGGCAC TGACTNANTC 
    NGGNNGACCA TTTNNATTCT NCCCCTGGNN AANGNACANN AAATNNGGNC 
    NNTAANNGGC TNTGAAGGNN CCANATTTNT TTGNTATTTT CCNACNCCCG 
    GGAAAGCNNN CCTCNAAANC NTNGGNATNA ANANNAACN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24090984 [Map]; Strand: w
      • AT5G59790.1 - [+] show detail - Domain of unknown function (DUF966)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0523-1 - 3-prime edge 
    GTCGGGACTG GTGTCTTGTT GGTCTTTGGA TCTCCTGGGG ACCAAATAGT 
    TGTTATCTGG TGTTGCTCTG AACACTCTTG AACTCATCCT TTTTGTTTCT 
    TTGCTTATGG AAAAGTGAAA GAAAAAAAGA AAAAGAGACG AAGAACACNG 
    AAGTAGTGAA GGAGTTTTAA AGTGAGAGTC TTTGTGGGAG TTTATGAGGG 
    AGTTGATGTT GATGGAAAGA CAAAATCTTT TGTTTAAGAG TTTGGATTTA 
    TAGAAAGCAA ATGAAAGCAG AGAGGAAAGA GAGAGTGAGA TTTTGAAAAA 
    TGAGGATGCG AGAGACAAAG GGCTACACAA CAAATGAAAC TTTGCTCTCA 
    ATCTCTCTCT CTTCTGGCTT TTCTGATATA AACATGTATC NGCTCTTACT 
    TGCGCCCCNN ANAAAAAAGC ATTTCCNCCA ANGTCAATTN AATTNAAATT 
    TCGGCCATGA CTAATNGAAT TATTTNCNNG GCTCTNNNAT GGNAGTGTGN 
    NNTCCAAATT TTCGNNAACN TTTNTAAAGA ANNGGCNNNA GATNCTTATT 
    ANNNNCTTCT TTTNNTTGTA GNNNGATAAA NTTCNTCNGG GACTNANANA 
    GANAAACCGT CNNNNTGGTT CCCANCCGNA GCNNNGANNN NTNNNNCNNN 
    NCNNNAGACC GANGNAGTAN ANNNAAAAAT CNNNATNNAA NNNGNCNGTC 
    NANNANAANN NAAANATCNN ANNGCTAAAN NNNACNCGAC ANTGNNCANN 
    AGAGNNANGC G

AT5G59790.1

Model type
Protein coding
Short Description
Domain of unknown function (DUF966)
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT3G46110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR