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11-0527-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7933352 [Map]; Strand: c
      • AT1G22470.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0527-1 - 5-prime edge 
    GGNACACNCC ACAGCGGCCC CNGGNACANG ANAGANNTNA CGCNCTGCAG 
    NATTNNCTAC NCCCTGGGCT CNACAANGGC NCANGCNCTN CTGATCAGTA 
    GCAGAAACAG AAGATCAATG CGGACAACAA CAGAATCAAA ACCCAAGAAT 
    CTTACGGTGA AGAGATCAGA TTCATCTTCA GACTATAACT ACTCATGCAA 
    GAAACATCCG AAGCACAGAC AATCTCCTGG AATATGTTCC CTTTGTCTTA 
    ACGAGAGTCT CTCCAAGTTG TCTAGTGAGT TTTATGACTA TAGCTCAAGC 
    ATGAGCTCGT CTTCTTTGGC TAAAACGATG TCGTCTTGCT CCTCCGCTTC 
    TTCGGAATCA GAATCAGATT TTTCTTCGAC GGCGATATCT TCTTATTACT 
    CTTCTGTCTC CTCTTGTTTA TCTCCTCTGC AACATAGATA CAGTGAGATC 
    GTCGTTAATA AGAAGAAAAA GAAACATGTC AAGAAACAAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7933459 [Map]; Strand: c
      • AT1G22470.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -69; Region: promoter
    Flanking Genome Sequence: 11-0527-1 - 3-prime edge 
    TNGTGNNCCN GNCNAGCGGG CTAGCTTNCC TGGCNGTGAA CNANANTTGN 
    TGTNTACGAG ATATTTCTTC ATTGTTATTT TCCCAAAAGG CCAAAACAAA 
    AAAACAATGG TTCATGTATA TGATTATTTA TTTGGAAAAT AGTTAATTGT 
    AGTAGTTAAG AAAAAANACA ATTAAATTGT AAGAAAATGA AAATGTTAGG 
    TCATTCTTCC ATATTANTAG TGACCAAAAT TCATAATTTA TTTATGATAA 
    TTCTGTTCTC AGATCAATCA TACAAACATA CACATTGTAT TTGTATTTAA 
    TTGCTAACGT AAAAACAAAT ANTTTTTNTT ATATNCGAAA ATTACNAAAT 
    AAAATT

AT1G22470.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72240.1); Has 1693 Blast hits to 236 proteins in 54 species: Archae - 0; Bacteria - 8; Metazoa - 451; Fungi - 116; Plants - 94; Viruses - 2; Other Eukaryotes - 1022 (source: NCBI BLink).
Link
InterPro Scan - TAIR