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11-0528-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13058688 [Map]; Strand: c
      • AT4G25580.1 - [+] show detail - CAP160 protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: 11-0528-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTTTGTTAAT CCTTTCTAAT GTGCGTTGTG GTTTGATGAT CCATGGCTTA
    TTTTGATGTA TCTACTACTA GTACCATGTA AAAGTATGAA TAAATTGAGT
    TAAATAGTAT TGTAACCTTA GTACAACACA AAAGGAGTAA AAATTATCGT
    CGACAGCAGG GTTCGAACCT GCGCGGGCGA AGCCCAACAG ATTTCAAGTC
    TGTCTCCTTA ACCACTCGGA CATATCGACT TCTTGTTTAA CCACGACGAG
    ATAGGAAATA TTATTCGTTT ATTTGAGAGT TACACAACAA AGCTACAAGG
    TTTGAACTTC TCTCCCAAAC GGAAGTAGAA AGAAAAGAAT GTTTATAAAA
    TGAATAAGAC ATAAAGAATT
  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13058680 [Map]; Strand: c
      • AT4G25580.1 - [+] show detail - CAP160 protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: 11-0528-1 - 5-prime edge
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCATA CATTTAAAAA GAAGAAGCAG AATCTCAGTT
    TCCAGATTCT TGAAATCTCT TTTGCAAAGG CATAGAACCT TGTTGGCCTG
    CCTCACCTCC TCCCGAACCC GTAATTCCCA TTTTATTCCC TAACCATCAT
    TACACCAAAT TAAAAGTCAT TACCACCGTC AAAAGCCGAA AACGTTGTTT
    AACAGGAAGA GGCGTGTATT ACCAATGGTG GAGCCAAGTG ACTGTGTAGA
    GTCTTGAACA GATTCTGTAG ACTTTTGCGT CACTTCTTCC GTCGTACCAG
    CGATCCAAGA AGTAACAGCT CCTCTCAGCT TCTCCGCAAT CCCTCCTTCG
    CCTTTCTCCG CATATGCTTC ACCCTGTTTC GTAGCTGCTT CCGAGCTCGG
    ATC

AT4G25580.1

Model type
Protein coding
Short Description
CAP160 protein
Computational Description
CAP160 protein; CONTAINS InterPro DOMAIN/s: CAP160 (InterPro:IPR012418); BEST Arabidopsis thaliana protein match is: CAP160 protein (TAIR:AT5G52300.1); Has 292 Blast hits to 249 proteins in 85 species: Archae - 0; Bacteria - 26; Metazoa - 66; Fungi - 33; Plants - 116; Viruses - 9; Other Eukaryotes - 42 (source: NCBI BLink).
Link
InterPro Scan - TAIR