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Mutant Lines
11-0538-1

11-0538-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1362632 [Map]; Strand: w
- AT1G04830.2 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -613; Region: promoter
- AT1G04830.1 - [+] show detail - Ypt/Rab-GAP domain of gyp1p superfamily protein
  Distance: -651; Region: promoter

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCAGT GGGGTAACCC GAATCACTTC GGCCTGATAT 
AGCTGTGGTG TGTGGCCTGG TCTCAGAAAT CATGAGCTTG TCCTAATCCC 
TACTCTTGTG TACAAGAACA TGACAAGATT TGTACCGGAA AGCGCCATGA 
ATAAACAAAA AATTCAAGCA GCTCAGGCTG GGATGTTACA GAACATCGCA 
TTCTTCCTTT TTGGTTTGAG TCATTGTTGT TGACTAACCT GAAGGGATCA 
ACTATATCAC CAATAATCAC CACATGAACA TCTTCCATCT TTGAAATGAT 
GAAACTGTCT TGCATCTCTC AGTAGAATAT CTCTTTGGCT GATCTTACTA 
ACATATTTCA TTAAAGAATG ACAATCTCCG CAGATTCTAA GGTTCTTAAT 
GATCCTTATC GTGGTCCCAG GAGCAGTTCT TAGAAACCCA AGTGTAAGAG 
CCAGTTTCTC ACTATGGATT CCCGTAACAT TTTCCTTCTC TTCTTCTTCA 
ATGTCATGAA TTGACCAATC AGCTCCTGGA TTGTATCCTT TCTGAATGGC 
AAGCGATATG ATCTCATCAA GCT

AT1G04830.1

Model type: Protein coding
Short Description: Ypt/Rab-GAP domain of gyp1p superfamily protein
Computational Description: Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G13730.1); Has 3724 Blast hits to 3613 proteins in 228 species: Archae - 0; Bacteria - 2; Metazoa - 1821; Fungi - 641; Plants - 593; Viruses - 0; Other Eukaryotes - 667 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04830.2

Model type: Protein coding
Short Description: Ypt/Rab-GAP domain of gyp1p superfamily protein
Computational Description: Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G13730.1).
Link: InterPro Scan - TAIR