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11-0541-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1245300 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-0541-1 - 3-prime edge
    ACCACAGCCG CCAATATCGA AAACGTCAAG AAGAACGGTG TTGCTCCATT 
    GCCTCCAAAA CCTATTCAAA CATTACTAAT TAATATTCTT AGTAATTCCA
    TTAAATCAGC CTACATGATC ATATATATAG CTATAGAGAT AAGAGAAAAA
    GAAATTTACC TTGGGTGGTT AGTTTGGCCG TTGATGTATT TATTGAGACA
    CCAACTTGCG AAACCAAGCA CAATCAGGTA CATAACAAGA TTCAAGAACA
    GCAATGGTGC TGCTATGTTT CTTCCCACTG TCGTCGCCAT CAATTTCTTC
    TTTTACCTTC TCCTAAAGAT CTAGTTTTAC TCTTTTGCTA CTCAAAACCT
    TTCTTCTCTA TGCAATTCAA CACTTAAACT AGTTGCTCGG TGATGATCTT
    TCTATATGGA ACGGATATGT GAGACATAGT TATATACACC GAGCTTATGT
    GTTCGTTGGC AAGGAGCACG TGCCATGCGA AGAGGACCTT TGTGTTTAGC
    TACTTACAGG TGGTGGGACA CGTGTCTTGA CGTTGTTTTA AAGNGTNGGA
    TATNGCCAGG TGTTGTCATT GAGCTCAAAT CTCNAAACGG NTNTNTNTAN
    NTNATNTGCC TTATGNNGNT ANNANANNGA AGGNCCCAAN GCTACGATAT
    ATNGGGGGNN NNNANTNANT NACTTTGTGA NAANCCANCG GGATTNNGTG
    AAAANNNGNN NGGAANGGGN GAAATGCNTT TNTTNATATG G

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR