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11-0551-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1521594 [Map]; Strand: w
      • AT3G05330.1 - [+] show detail - cyclin family
        Distance: -100; Region: promoter
    Flanking Genome Sequence: 11-0551-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGTT ACGCTTACTC 
    ATAACGGCTA TCTTTTTTTA GTGTGTGTGA GCCAATTTTA CTTTATAATC
    TTCAAACTAA ATTGGTGTGA ATTTAGTGGC CTGTGGGACT ACATGAGCCG
    TTAGCCCGTT ATGTAGTATT TTTATTTTTT TGAACTCCAA AATTGTAAAT
    GCCAAATTAT CTCTAGGGTC TAGAAGATTA ATCTTGGGAG AATTTTTCTA
    AGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1521502 [Map]; Strand: w
      • AT3G05330.1 - [+] show detail - cyclin family
        Distance: -8; Region: promoter
    Flanking Genome Sequence: 11-0551-1 - 3-prime edge
    GTTGGGACAA AAAAATAAAT AAAATTAAAT AGTAACGAAA GATCCGTTAC 
    GAAAGTGAAC ACCTTTATCC GCTCTCTCTC TCAGTTCCCG TGCCTAATTG
    ACTTTACGTT CCGACAAGAC CCAAATAGAC ACAACAAACA AGACCCAAAT
    CGAAGATAGG ATTCGCGTTT ATGTTGGTGT CCGTAACCTA AAAAGACATT
    CTAGAGTGAT TGAGATCGAG AGAAGGAAAG AGAGAGTGAG AGAGAAATCT
    GGGTTTCTTG AAGCTGTTGT GAGGATCTTG TTATGGGTGG TTTTATTACA
    AAGGCTTGAG CTTTTTATCT TCAAAGCCCA GTTTTCAAAC AGAGAGAAGT
    TTTTGGGTTA ATCTAGTGAG AATTTAAAGA AAATATATAT AGAAGATGGT
    TGCAAGAACC CCACAGAAGC AGAGGAAAGT GGCGATGGTG GTGCCTCCTC
    TCAACTCANA TCTTCTCAAG GAAACGATCA ACAAGGTNTT TTATCCAATT
    TAATACAANG ATTNGCATAN NGTTTACTGC TTTTAATTTT ATCAAAATTT
    GCAAACGCTC CNGNTCTAAG GGNTCCTTCC CACTATGTNN NAAGGTNCNA
    NNCNNGGGNC GNNACCNNCC GTGNNNNTTN NNNNNNNNGN NNNNNNNANN
    NANNNNNG

AT3G05330.1

Model type
Protein coding
Short Description
cyclin family
Curator Summary
Encodes a protein with moderate sequence similarity to the maize microtubule-binding protein TANGLED1. A single base-pair deletion (-A) at position Chr3:1519176 in Columbia relative to the Landsberg erecta and Achkarren-2 ecotype (see ESTs DR378436 and CB26450) introduces a frame-shift and premature termination codon. The protein encoded from the Columbia gene is truncated by 29 amino acids relative to the Landsberg erecta and Achkarren-2 encoded proteins. Involved in the identification of the division plane during mitosis amd cytokinesis
Computational Description
TANGLED (ATN); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytokinesis, initiation of separation, phragmoplast assembly; LOCATED IN: microtubule associated complex, preprophase band; EXPRESSED IN: cultured cell; Has 705 Blast hits to 473 proteins in 108 species: Archae - 0; Bacteria - 3; Metazoa - 504; Fungi - 31; Plants - 75; Viruses - 28; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR