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11-0555-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1515037 [Map]; Strand: c
      • AT1G05230.3 - [+] show detail - homeodomain GLABROUS 2
        Distance: 0; Region: intron5 (CDS)
      • AT1G05230.1 - [+] show detail - homeodomain GLABROUS 2
        Distance: 0; Region: intron5 (CDS)
      • AT1G05230.2 - [+] show detail - homeodomain GLABROUS 2
        Distance: 0; Region: intron6 (CDS)
      • AT1G05230.4 - [+] show detail - homeodomain GLABROUS 2
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: 11-0555-1 - 3-prime edge
    GTTGAAACTA AACAGAGAAG ATTGCTTTTA AGTAAAATGA AAATGTTAAT 
    TACCACATCC ATGAGAATCT CAACGATGCT AACATGATTC ATGATCACAA
    CCGCGCTTTC TCGCGAAGCT

AT1G05230.1

Model type
Protein coding
Short Description
homeodomain GLABROUS 2
Curator Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.
Computational Description
homeodomain GLABROUS 2 (HDG2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, trichome morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1); Has 8730 Blast hits to 8651 proteins in 460 species: Archae - 0; Bacteria - 0; Metazoa - 6110; Fungi - 222; Plants - 2153; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05230.2

Model type
Protein coding
Short Description
homeodomain GLABROUS 2
Curator Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.
Computational Description
homeodomain GLABROUS 2 (HDG2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, trichome morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1); Has 8732 Blast hits to 8653 proteins in 460 species: Archae - 0; Bacteria - 0; Metazoa - 6111; Fungi - 223; Plants - 2153; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05230.3

Model type
Protein coding
Short Description
homeodomain GLABROUS 2
Curator Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.
Computational Description
homeodomain GLABROUS 2 (HDG2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, trichome morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05230.4

Model type
Protein coding
Short Description
homeodomain GLABROUS 2
Curator Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.
Computational Description
homeodomain GLABROUS 2 (HDG2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, trichome morphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: protodermal factor 2 (TAIR:AT4G04890.1).
Link
InterPro Scan - TAIR