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11-0560-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1279640 [Map]; Strand: c
    Flanking Genome Sequence: 11-0560-1 - 5-prime edge 
    AAATTTATGA ATGGTACCCC TTCACGTTTC AAGCCCGCAG CAACGGCTAG 
    ACCTGATGGG CCAGCTCCGA CGATGACGGG TCCATTGACC CAGATGCAAC 
    GCCGGAAGAA AATGTCGCCT GCCTTCGGGG ATGAGGTTTT GAAACATACT 
    CGTGATGTTG ATAGACTTCT TGTTATTATT TCCATACATC TTCCACAGAG 
    TTTAGAGTTT GCTTGTCTGG TTGTGAGGAG AAAACAGAAG AAATTTTAAG 
    AATGTAGAAG AAGAAAAAAG AAAGATGTTG GAAACTTTTT AAGACAAGAG 
    GATGGAGATG TAAGTGTATG TGTGTGTTCT GTTGGATTGG AGAAGGAGAT 
    GTATAAATAG AGAAGACGAC TTGATGCAAA TTGGTAATTG TAAAATTAGT 
    AAAAATATTA TTATTATATA TTTAGCTTCT GAATGTTATT TATATCTCAA 
    ATGATAAGCT

AT1G04610.1

Model type
Protein coding
Short Description
YUCCA 3
Computational Description
YUCCA 3 (YUC3); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: auxin biosynthetic process; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: YUCCA 7 (TAIR:AT2G33230.1); Has 9657 Blast hits to 9637 proteins in 1196 species: Archae - 33; Bacteria - 4899; Metazoa - 784; Fungi - 1494; Plants - 670; Viruses - 0; Other Eukaryotes - 1777 (source: NCBI BLink).
Link
InterPro Scan - TAIR