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11-0565-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1338868 [Map]; Strand: c
      • AT1G04770.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: -1019; Region: intergenic
      • AT1G04778.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1024; Region: intergenic
    Flanking Genome Sequence: 11-0565-1 - 3-prime edge 
    GTAAAATGAG TATATTTTAA AAAGGTGTAA ATAGGCTAAT GGAAACATCA 
    TAATGATAAT TCATTCCAAC GCCACGCCTT AACATACTTT GTTAGCTGTT 
    ATTATTAGTA CCATCTATGG CCCAAATGCA TAACATACAC CTTTCATGAT 
    CTTGTTGTTT GTGTATAAAC TATACTAGAT ATAGTAAGTC GTGTGTATAA 
    TAATAATATT GATATTACCT AAACATGATC AAGTGCATAT ACTACNTTCA 
    GTAAACACAA TGACACATGG ATAGATACAC ATGGATAGAG ACNCATGGAT 
    NGATACATAT GTTTACAAAA CCAAAACGGN TNNAAATNGA AATGATANAC 
    GANGATCATG CNAATNTAGA CATCNNTTAN TGATATACAC ATATATCTAG 
    TGTATGNTAN ACACAACNGG AAAGATTNAT GATGGACNNN NCACANNTGT 
    NGGCTTTTGA ACNAATTNGN ANCTAAATGN NCNNNTNTNG GGAGANAGNN 
    NGAGCNNTNN AAANTNNCNT GNNCGTATCA NGNCGANGAT TGANTGGGGN 
    NANNNANATN AANCTAACAC CGANACNTTT TCTCTNGATN NCTANATANN 
    NNANTAANTN ANACNAAAGA NCNCNCGAAN NCANCNACNN NGNNGNNATN 
    TNNNCCNNNA TCNTGNCCAN ANANNGANNT GTTATNCNTN AAANCNAATC 
    ATANANACNN TTNCCNTCNN AANNNTCAAG TNGAAANANT ANNTNNGAAC 
    NTAANT

AT1G04770.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G48850.1); Has 226 Blast hits to 224 proteins in 29 species: Archae - 0; Bacteria - 22; Metazoa - 1; Fungi - 0; Plants - 173; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04778.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR