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11-0568-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5410699 [Map]; Strand: c
      • AT1G15730.1 - [+] show detail - Cobalamin biosynthesis CobW-like protein
        Distance: -712; Region: promoter
      • AT1G15740.1 - [+] show detail - Leucine-rich repeat family protein
        Distance: -209; Region: promoter
    Flanking Genome Sequence: 11-0568-1 - 3-prime edge
    ATTGAGATGG AGTAAAACAA AAAGGAATAA GAAGAAAAGA AATAAATCGT 
    TGAAATCTCA AAGAGGGGTC CACTTAAAAG TGGGACCTTG ACCTTCTTTA
    TTCTTCCATC TTATCTCAAA AACGCATTAG ATTGTTCCGA ACCTAACTCC
    TTTCCTCACT AAGGGTGATT CATCTTACAC GTGTCATCCG ATAGTAGGTT
    AAGAAACAGG CTCGGCTCAC GGCCACTTTG CACATTTCTA TACTCTTCTC
    TCTTTCTTAT TCCTCACCTT CCTTGTTCAA TCACCGTCTC CTCAAAATCA
    CAACACCAAC AAAACAAAAA AAAGGTTTTG ATCAAAGAGA TCACTGTTAA
    ACCCTCACAA AATTTCCTCA GGACTAATAA TCTGCGATCG ATCGTCGTTA
    TGATAAGGTA CGTATCAGCT TATTCGATCA ACTAGCACAA CTGTTTCCTG
    GTGAACAGTT ACTTTATATT GCTTCCCTAT ACTTGTCTTT TATATTAAGC
    TACCANCCCG GGCCGNCGAC CACCCGGCCC CTATNAA
  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5410632 [Map]; Strand: c
      • AT1G15730.1 - [+] show detail - Cobalamin biosynthesis CobW-like protein
        Distance: -645; Region: promoter
      • AT1G15740.1 - [+] show detail - Leucine-rich repeat family protein
        Distance: -276; Region: promoter
    Flanking Genome Sequence: 11-0568-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACAGTCTAC ACATGTATGC 
    TCGAGTCTNT NNACTNTGGG AATCTGAATA ATGCGGAAGC TGCTACGANT
    CTTGAGAGGT TTTGTGTGCA ACCGACNATA CNNAAACTGT TGACGAATCG
    GNTACCCGTT NGGATGGAGA GATCANCANC CGNGGAGAAG CTACCATCCC
    GGGCCGCCNA CCACTGCGTG GCCNTNTAGC CACATTTTTT AGTTTATAAC
    CGAAAAAAAA TTGTGAGATG ATGAAGAGTA ACCTTGGATA TGCATAAACA
    AGAAAATCAA TAAATATAAT TACTCGAAAT TTGACAGTTC TTGTTTTANA
    AACAATTTTA ATCACATTAT CTTCTATTGA CATCAATACA GTTGCAAAAC
    AAACTAATTC TCGAAACTGA TATCANAAAT TGTCGCCATA TATTTGTTAT
    AACTAGATTT AGGATTATGC TCTTCTTCAA GTTTTGCATC TAATTTTGAT
    GCACGCATTC TGAATTTCTG ATTAATATAT TTTGTAACAA AAATGACTAC
    AATATCTCAT GTGCTATAAT TTTAATCCTT TTTCATACAT TNATGTTTTA
    CCATTTTGTT TTTCTTTCNA AATAATACAA GTCAAATCTC GACCGTTGGA
    TGGAACCGGA AAAAAAAANN ANCNTAAAAA ACCCGNGNAA ATTNTGAACN
    TNCAGGGTTA AACTNGNNTT TTTTNTNGNC CNAACCNTTN NAAAANNCNT
    TGGANCCCNA ANA

AT1G15730.1

Model type
Protein coding
Short Description
Cobalamin biosynthesis CobW-like protein
Computational Description
Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 17 (TAIR:AT1G80480.1); Has 16369 Blast hits to 11834 proteins in 1861 species: Archae - 128; Bacteria - 8189; Metazoa - 1729; Fungi - 553; Plants - 409; Viruses - 6; Other Eukaryotes - 5355 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G15740.1

Model type
Protein coding
Short Description
Leucine-rich repeat family protein
Computational Description
Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink).
Link
InterPro Scan - TAIR