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11-0568-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5410699 [Map]; Strand: c
      • AT1G15730.1 - [+] show detail - Cobalamin biosynthesis CobW-like protein
        Distance: -712; Region: promoter
      • AT1G15740.1 - [+] show detail - Leucine-rich repeat family protein
        Distance: -209; Region: promoter
    Flanking Genome Sequence: 11-0568-1 - 3-prime edge 
    ATTGAGATGG AGTAAAACAA AAAGGAATAA GAAGAAAAGA AATAAATCGT 
    TGAAATCTCA AAGAGGGGTC CACTTAAAAG TGGGACCTTG ACCTTCTTTA 
    TTCTTCCATC TTATCTCAAA AACGCATTAG ATTGTTCCGA ACCTAACTCC 
    TTTCCTCACT AAGGGTGATT CATCTTACAC GTGTCATCCG ATAGTAGGTT 
    AAGAAACAGG CTCGGCTCAC GGCCACTTTG CACATTTCTA TACTCTTCTC 
    TCTTTCTTAT TCCTCACCTT CCTTGTTCAA TCACCGTCTC CTCAAAATCA 
    CAACACCAAC AAAACAAAAA AAAGGTTTTG ATCAAAGAGA TCACTGTTAA 
    ACCCTCACAA AATTTCCTCA GGACTAATAA TCTGCGATCG ATCGTCGTTA 
    TGATAAGGTA CGTATCAGCT TATTCGATCA ACTAGCACAA CTGTTTCCTG 
    GTGAACAGTT ACTTTATATT GCTTCCCTAT ACTTGTCTTT TATATTAAGC 
    TACCANCCCG GGCCGNCGAC CACCCGGCCC CTATNAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5410632 [Map]; Strand: c
      • AT1G15730.1 - [+] show detail - Cobalamin biosynthesis CobW-like protein
        Distance: -645; Region: promoter
      • AT1G15740.1 - [+] show detail - Leucine-rich repeat family protein
        Distance: -276; Region: promoter
    Flanking Genome Sequence: 11-0568-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACAGTCTAC ACATGTATGC 
    TCGAGTCTNT NNACTNTGGG AATCTGAATA ATGCGGAAGC TGCTACGANT 
    CTTGAGAGGT TTTGTGTGCA ACCGACNATA CNNAAACTGT TGACGAATCG 
    GNTACCCGTT NGGATGGAGA GATCANCANC CGNGGAGAAG CTACCATCCC 
    GGGCCGCCNA CCACTGCGTG GCCNTNTAGC CACATTTTTT AGTTTATAAC 
    CGAAAAAAAA TTGTGAGATG ATGAAGAGTA ACCTTGGATA TGCATAAACA 
    AGAAAATCAA TAAATATAAT TACTCGAAAT TTGACAGTTC TTGTTTTANA 
    AACAATTTTA ATCACATTAT CTTCTATTGA CATCAATACA GTTGCAAAAC 
    AAACTAATTC TCGAAACTGA TATCANAAAT TGTCGCCATA TATTTGTTAT 
    AACTAGATTT AGGATTATGC TCTTCTTCAA GTTTTGCATC TAATTTTGAT 
    GCACGCATTC TGAATTTCTG ATTAATATAT TTTGTAACAA AAATGACTAC 
    AATATCTCAT GTGCTATAAT TTTAATCCTT TTTCATACAT TNATGTTTTA 
    CCATTTTGTT TTTCTTTCNA AATAATACAA GTCAAATCTC GACCGTTGGA 
    TGGAACCGGA AAAAAAAANN ANCNTAAAAA ACCCGNGNAA ATTNTGAACN 
    TNCAGGGTTA AACTNGNNTT TTTTNTNGNC CNAACCNTTN NAAAANNCNT 
    TGGANCCCNA ANA

AT1G15730.1

Model type
Protein coding
Short Description
Cobalamin biosynthesis CobW-like protein
Computational Description
Cobalamin biosynthesis CobW-like protein; CONTAINS InterPro DOMAIN/s: Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 17 (TAIR:AT1G80480.1); Has 16369 Blast hits to 11834 proteins in 1861 species: Archae - 128; Bacteria - 8189; Metazoa - 1729; Fungi - 553; Plants - 409; Viruses - 6; Other Eukaryotes - 5355 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G15740.1

Model type
Protein coding
Short Description
Leucine-rich repeat family protein
Computational Description
Leucine-rich repeat family protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G23840.1); Has 38052 Blast hits to 19856 proteins in 856 species: Archae - 6; Bacteria - 8624; Metazoa - 11681; Fungi - 680; Plants - 12072; Viruses - 79; Other Eukaryotes - 4910 (source: NCBI BLink).
Link
InterPro Scan - TAIR