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11-0570-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 17202936 [Map]; Strand: w
      • AT1G46048.1 - [+] show detail - pseudogene, hypothetical protein
        Distance: -371; Region: promoter
      • AT1G46120.1 - [+] show detail - transposable element gene
        Distance: -749; Region: promoter
    Flanking Genome Sequence: 11-0570-1 - 5-prime edge 
    GTCCGGCCCA AAGCCCGCAA AACTCACATA TGTCTGAGTC CGGTCCGTAA 
    ATTTCTGAGC CTATGTATTT TAAAGATTAG CCCCGCTCTA GCAGGACTAC 
    AAGGTTTTTA GAGTGAAGTT AACAGTTTTT TTCCTTTCCA TATGGAGCAA 
    AAGGAAGCT

AT1G46048.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR

AT1G46120.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 1.6e-32 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)
Link
InterPro Scan - TAIR