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11-0572-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2347205 [Map]; Strand: w
      • AT1G07620.1 - [+] show detail - GTP-binding protein Obg/CgtA
        Distance: -363; Region: promoter
    Flanking Genome Sequence: 11-0572-1 - 5-prime edge 
    GNNNANGNCA ANNNNCANGA CTTGGNGNAN TANGNTCNGN GCGCANNATT 
    ATANATNANT ANCGATCCAA NGCNTCANAT GANGTGATGG ATTACTGCNC 
    NNNNGANNCA GNNAATTGTT GCNCGATTNT TTCTTTTCTT TTTAAAGAAG 
    AAGCAAAAGT TGTGATCAAG TAAATTGTCG TCATATCAAA TATCTTGTGC 
    GTAACCAAAT TTAAATATAT TAACGGTTTC TAAAATTGCG CTGGTAAAGT 
    ATGTGAACAA CCCAAGAGGG ATGAGTAGTT ACGTTAGTTG TTAGGCTACT 
    TGTGTTTGTG GCAAATTGTT GACACTCTTT GTATGGGAGG TAGGCCATCT 
    TTTTGGCTGC TTANGTTTNC TGTAAATATT AATTCTGNCA AATGATAACA 
    GAATGTNGTA TATCTAGTTA TATATAAATA GTACTATGCA AGCCANAATT 
    GACTTGGAAG CTAAGGTTGA CTTGGAAGAT TAAAACCCTA ATAACGCTTN 
    ATATTTAACC GNACTNGAAN GAANACCTTA TACAACCCAN ATATATATTN 
    NAAGGCANAA TGAGAAAAGA GAGAANATNT NTATCATTCA NGTNNGCAAG 
    TTGGCCGGTT NNNAAACCAA TTTANTATGN ANANTAAGAT NNGTTACTTT 
    TANTNACNTT NTAATAAGCC GNGAANGGNC CTNTTANTAN TAAACATAAA 
    ACANAAACNN AAANNAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2347096 [Map]; Strand: w
      • AT1G07620.1 - [+] show detail - GTP-binding protein Obg/CgtA
        Distance: -254; Region: promoter
    Flanking Genome Sequence: 11-0572-1 - 3-prime edge 
    TACAACAGGA CATTATTTTA AATAATAAAT CTATGAAATC TACCTTATAA 
    ACGTGCACTA ACAAAAGAAA TGATACGTAC GTATATTCGT AGCAATAAAT 
    ATAAGGGAAA CTATTTTATT AAATTCTGAA TTACAAGTTG AAAAGTACTA 
    GATATTGAAT TTAGTTTAGA AAAATACAAG TGTTTCAATG AGGAAAAAAC 
    AAATTATTCA TGTATATTTC TCGTGGCGTG TGAGCGTTAT ATATATAGAT 
    GAAACAGACA TTTTGACAGT TTTCTACAAG TAGACCGGGC CATAGTTGGC 
    GGGTAAAGAC TAAAGTAGAA CCACATAGGA GAACGAAAAG TCTCAGTTTC 
    ATCGTCCTTG TTCATGGTCT TCCTCGTTTT TCTTCCAGAC ACCTTCCGTT 
    GCATCAACCC CTATTGAGGT TTTTGTTGTT CTTGTTCCTT ATGTTCTTCG 
    GTTTGTATAA TACCAAACAA TTTGGTTGTC TCAGTCACTT CCTTCTTCTT 
    GTTCTTGAAT ATTGATCAGG TCAGTTTCTA CCGTATAACT TTTTAACGGC 
    TNTTATATAT NCTTCTTTTG CTTANGGTTT ATCAAAATTA TGGAACAAGA 
    AAGATTATTT GNTTCTTTGA CTTGGTTATA TTNGATTGGN TTTTTGAAGA 
    TTCAGACTAG CNTCCTAANN CTNTCGNNNN ACTAAANNNN GGNTTTTTTT 
    TTAANANNNN GGGGGANNAA NC

AT1G07620.1

Model type
Protein coding
Short Description
GTP-binding protein Obg/CgtA
Computational Description
ATOBGM; FUNCTIONS IN: magnesium ion binding, GTP binding, GTPase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GTP-binding protein Obg/CgtA (InterPro:IPR014100); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT5G02390.1); Has 561 Blast hits to 511 proteins in 87 species: Archae - 0; Bacteria - 20; Metazoa - 47; Fungi - 31; Plants - 219; Viruses - 2; Other Eukaryotes - 242 (source: NCBI BLink).
Link
InterPro Scan - TAIR