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Mutant Lines
11-0575-1

11-0575-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 1986727 [Map]; Strand: w
- AT5G06510.1 - [+] show detail - nuclear factor Y, subunit A10
  Distance: 0; Region: exon5 (3UTR)
- AT5G06510.3 - [+] show detail - nuclear factor Y, subunit A10
  Distance: 0; Region: exon4 (3UTR)
- AT5G06510.2 - [+] show detail - nuclear factor Y, subunit A10
  Distance: 0; Region: exon4 (3UTR)

GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT TTTACCATCC GTTTGGCTGT AAACAGGCAA 
ATCATCTTTG GCTCATGCTT CATCAAGTTC TTATCTTCGT CTGTTTTCTT 
CTACTTCTAC GCATCTTCAT AAGATCTCTG AACTAGTGAA TAACATTTCC 
TAGCATCATG TTTCAACTAG TGTGTGTTGT AGGAAACTCT GCCTTATTTC 
CAGATGATGT ATTGTGTGTA ACGTGTTTAT GAAACAAACG TAAGACTTTC 
AAGTTAATGT GGTTTTTATG TAACAAAGTT AAAAGACTTT ATTTCCATTG 
TCTATTCTCA TCCTGATACT GTGTAAGAAG AAGCT

3 prime edge [+] show sequence

Chromosome: 5; Position: 1986723 [Map]; Strand: w
- AT5G06510.1 - [+] show detail - nuclear factor Y, subunit A10
  Distance: 0; Region: exon5 (3UTR)
- AT5G06510.3 - [+] show detail - nuclear factor Y, subunit A10
  Distance: 0; Region: exon4 (3UTR)
- AT5G06510.2 - [+] show detail - nuclear factor Y, subunit A10
  Distance: 0; Region: exon4 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAA 
AGGACCAATC TTATAAACCA AGGAAACTCA ATGTCTTTTT TCCAAGACAC 
AAGGTCTCTT TCCGTTTGGC TGAAAGATAA GGGACAAGAC AAAAGACTGG 
TGAACCAAAT CATGTCTTGT CCCCTATCTG CTGATCATAT ATTAAGTTTG 
CAGCAGCCAA TATCCATTGC TGCTGCATTC CACTTGATAG GCATGACCAT 
GCCACCAGGA GAATAAGCCG ACGAACTTAG AAAGTAATCC ATACTTGTAA 
CTGCAGAATC CGAGAGATTT GACTCATTTG CTTCCCTCGA TGAGTTTATG 
GTCTCATTTT CCGGATGAAA GACTTCAGAA CTCTGAGAAT TACTCGGCTT 
AGACTGCTTA GCCGCATCAG CTGTCTTGGT GTTCAAGAAA CGCCCGCCAG 
ATCCTCTAGG ACGGCGCATA GCATGGAGAT GGCGTGAGTG ATGCATATAT 
GGCTGAAACA TCATAACATA AGGCAACATG TTTTGAATGC ATAACTGAAA 
AAATGATCAG ATAGTTTCAA TAAGTTACCT TACGGCATCT ACTCAGTTTT 
TCAGCCTTTG CTCGGGACTG GCGTCGCCTG ATAATTCCAT GGTACTGCTT 
TGAGTTCACA TAGATGGTAC CATCTTCTTC TGTCTCCATC TTCAGNGGAA 
TCATTACTCG GCCCCGAANA CCTCTGAAAT CCGTATGCTG AAACAACTCC 
ATAGTATTGT TC

AT5G06510.1

Model type: Protein coding
Short Description: nuclear factor Y, subunit A10
Computational Description: "nuclear factor Y, subunit A10" (NF-YA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: stem, vascular tissue, embryo, leaf whorl, seed; EXPRESSED DURING: F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A2 (TAIR:AT3G05690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G06510.2

Model type: Protein coding
Short Description: nuclear factor Y, subunit A10
Computational Description: "nuclear factor Y, subunit A10" (NF-YA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: stem, vascular tissue, embryo, leaf whorl, seed; EXPRESSED DURING: F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A2 (TAIR:AT3G05690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G06510.3

Model type: Protein coding
Short Description: nuclear factor Y, subunit A10
Computational Description: "nuclear factor Y, subunit A10" (NF-YA10); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: stem, vascular tissue, embryo, leaf whorl, seed; EXPRESSED DURING: F mature embryo stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit A2 (TAIR:AT3G05690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR