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11-0577-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8982696 [Map]; Strand: w
      • AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0577-1 - 5-prime edge
    CTCGGAACCT CCTCACGGCG ATGTCGTAAG AAGACGCAGC TTCTTCTTCC 
    TCGTTGAAAG TACCCAGCCA AACTCGCTGA TGCTTCTCGT AAATCTGAGC
    TCCCCATCTT CCGTTAGGCT GAGGCACAAC GCCTTTGTAT TTCGACGACG
    GAAGCT

AT1G25560.1

Model type
Protein coding
Short Description
AP2/B3 transcription factor family protein
Curator Summary
Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Computational Description
TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR