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11-0582-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11468877 [Map]; Strand: c
      • AT1G31930.3 - [+] show detail - extra-large GTP-binding protein 3
        Distance: 0; Region: exon9 (CDS)
      • AT1G31930.2 - [+] show detail - extra-large GTP-binding protein 3
        Distance: 0; Region: exon9 (CDS)
      • AT1G31930.1 - [+] show detail - extra-large GTP-binding protein 3
        Distance: 0; Region: exon10 (CDS)
      • AT1G31935.1 - [+] show detail - other RNA
        Distance: -605; Region: promoter
    Flanking Genome Sequence: 11-0582-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT CCTTCTCTTC ATCCCATTTC AAAACCTCTC 
    TCACATACTT AAACCCTTCA TCCACATTCG CGCGGTCCCT AGCCCGAGCT 
    TGCCACACAA ACAGTTTCTG ACCCGTGATA GAAAAGTAAA GAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11468881 [Map]; Strand: c
      • AT1G31930.3 - [+] show detail - extra-large GTP-binding protein 3
        Distance: 0; Region: exon9 (CDS)
      • AT1G31930.2 - [+] show detail - extra-large GTP-binding protein 3
        Distance: 0; Region: exon9 (CDS)
      • AT1G31930.1 - [+] show detail - extra-large GTP-binding protein 3
        Distance: 0; Region: exon10 (CDS)
      • AT1G31935.1 - [+] show detail - other RNA
        Distance: -601; Region: promoter
    Flanking Genome Sequence: 11-0582-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATNGN 
    NGANAGNTCC NTGCCTGGCG GTGGANNAGA TNCGNNNTAT AGNACANGNT 
    ATNANTTCAT CACCATATAG ACCGGAGGAG TAAAATATTA TATCTCCATG 
    AGGAAACTCT TGATTAAATG ATTTGTTGTT ATTTTTTAAC NTTTTAAGTA 
    GAGAGATAAT GTGGGAAGAA GAAAAATAAA ATTATTTGTA ATCGCAGAAA 
    TTTTTTATTT GAATGCCAAG GTTTTGTAAG TTGGTACACC AAATTGTTTC 
    TTTGAGATTT TCTTACACAT AATGTATATG AAGGTTTTAA GAAAAAAAGT 
    TATTGAAAGC TAGTAGAGAG ATTAGTTATT TGTCTAGAGA ATAAAACATA 
    TCCAATCTTT TAAGATGATA ATAGATACAT AATCAGTGAA TTGTTGTGAT 
    CTTTTTGGAC AAAGAATAAT ATGATATTTT ATATTTTTAG AAGTANCANA 
    GAGTAGGAAG TTTGGTGAAC TGCACANACA GAGTCATGTG AGTCATGAGA 
    GTAACTTCAA TTCAAAGCAA AGGTTNTTAA TTNNCCATCT TATCTCCTTT 
    NATTCTTTCT TTTTGCATTC TATTTATTGT CATCATTTCA ACNTCTCTNT 
    TCACATCCNT ATTGCCNNTT GTNGAAAGAA AAANACAAGA GTNATGGGGT 
    CCTTGAAGCT NTCNTCTTTT ACACCACNTC TTCNTAATGT TCTCTTGNAN 
    NCNTCACTTT NTNNTGGTTN AGNCAGATNN TACAAGA

AT1G31930.1

Model type
Protein coding
Short Description
extra-large GTP-binding protein 3
Curator Summary
Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.
Computational Description
extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: guanyl nucleotide binding, signal transducer activity; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1); Has 3436 Blast hits to 3429 proteins in 399 species: Archae - 0; Bacteria - 2; Metazoa - 2221; Fungi - 595; Plants - 371; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G31930.2

Model type
Protein coding
Short Description
extra-large GTP-binding protein 3
Curator Summary
Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.
Computational Description
extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1); Has 3436 Blast hits to 3429 proteins in 399 species: Archae - 0; Bacteria - 2; Metazoa - 2221; Fungi - 595; Plants - 371; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G31930.3

Model type
Protein coding
Short Description
extra-large GTP-binding protein 3
Curator Summary
Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.
Computational Description
extra-large GTP-binding protein 3 (XLG3); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 11 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large G-protein 1 (TAIR:AT2G23460.1).
Link
InterPro Scan - TAIR

AT1G31935.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR