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11-0589-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19016566 [Map]; Strand: c
      • AT5G46870.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 11-0589-1 - 3-prime edge 
    GATGAGAAGC ATCAGTTGAC ATCAACAGCT TCAGCTAGAG TTACATCTTT 
    CGACAAAAGA ATCGGATTCA CGGAGAAAAT CAAC

AT5G46870.1

Model type
Protein coding
Short Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description
RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: oxidoreductase activity, nucleotide binding, nucleic acid binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G17720.1); Has 416 Blast hits to 410 proteins in 105 species: Archae - 0; Bacteria - 15; Metazoa - 8; Fungi - 115; Plants - 241; Viruses - 7; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR