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11-0603-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7890118 [Map]; Strand: w
      • AT1G22330.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
        Distance: 584; Region: intergenic
      • AT1G22340.1 - [+] show detail - UDP-glucosyl transferase 85A7
        Distance: 346; Region: intergenic
    Flanking Genome Sequence: 11-0603-1 - 5-prime edge
    GNTCAAGCNA CGCGCCCGAC AGTAGNGACT CCCACTNCGN GCGCAGGATC 
    ANCATCCNGG GCGNGCAANG ANACGTGCAC ATAGATGGAT CACNATNGNN
    GNGGAAATGN GCACTTCTTG TAAAATAGAA TACAAAATTT GTTTCCGGTA
    GTACATCTTG CACAGGAAAA GATGAAGTTT TTTTTNNGTG GAAGTTTATT
    TTNGGGGGGG GANNNTAACA GTTTTTNGGT TTCGACAAAN AAAAANAAAA
    GNTANTANNC TAAANTNATT NNATGGCANT NNANNCCGGA TTNCAANCAG
    AAANTAAAAA CNANTNAAAA TTATNNNGAA AAAAANAAGA AANANATNNN
    ATNGGNCAAN NGGGNNTNCC NNCAANNCGA NNNNANNAAN TTNGAATTAA
    TNACCGAANT NAAACNNGGA NANNNNAAGA TCAGGNNAAN AAANACNNGT
    GNNNGNNAAA GNNTNTNNAG NANTGAAGNN CCAGNNANAA CNANGGNGAA
    AGANATNGAN AGNGNNATAN NGNCGAATNN GGNGAANTNC TTNAGATATA
    NNANAGNNNA AGAATTAAAC ACNANNTTNN GNNATANGNT AANAGNTNAN
    ANTANGTNNA GNGGTGAANT TTCCGGGNCT NCNCTANATC GGNAGAAAGG
    NGCNTGTCCG AANGACNNAA GGGNCNGNAA ANANANNAGA GCANATANGA
    CAANAGANNN NCNGTAGANA TGAGANGAGA GGANATANGG AANNGGGAGN
    ANNCNGAA

AT1G22330.1

Model type
Protein coding
Short Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description
RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G78260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G22340.1

Model type
Protein coding
Short Description
UDP-glucosyl transferase 85A7
Computational Description
UDP-glucosyl transferase 85A7 (UGT85A7); FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, glucuronosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 85A2 (TAIR:AT1G22360.1); Has 7763 Blast hits to 7662 proteins in 424 species: Archae - 0; Bacteria - 289; Metazoa - 2112; Fungi - 32; Plants - 5212; Viruses - 58; Other Eukaryotes - 60 (source: NCBI BLink).
Link
InterPro Scan - TAIR