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11-0606-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7145252 [Map]; Strand: w
      • AT1G20620.1 - [+] show detail - catalase 3
        Distance: 0; Region: exon4 (CDS)
      • AT1G20620.2 - [+] show detail - catalase 3
        Distance: 0; Region: exon4 (CDS)
      • AT1G20620.5 - [+] show detail - catalase 3
        Distance: 0; Region: exon4 (CDS)
      • AT1G20620.4 - [+] show detail - catalase 3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0606-1 - 5-prime edge 
    ACAGCCACGC CACTAAGGAT CTCCACGATG CCATTGCATC TGGCAACTAC 
    CCCGAGTGGA AACTTTTCAT CCAGACCATG GATCCTGCAG ATGAGGATAA 
    GTTTGACTTT GACCCACTTG ATGTGACCAA GATC

AT1G20620.1

Model type
Protein coding
Short Description
catalase 3
Curator Summary
Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.
Computational Description
catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 11 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6176 Blast hits to 6156 proteins in 1860 species: Archae - 22; Bacteria - 4351; Metazoa - 678; Fungi - 546; Plants - 456; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20620.2

Model type
Protein coding
Short Description
catalase 3
Curator Summary
Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.
Computational Description
catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase (InterPro:IPR002226), Catalase related subgroup (InterPro:IPR018028), Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase, N-terminal (InterPro:IPR011614); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20620.4

Model type
Protein coding
Short Description
catalase 3
Curator Summary
Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.
Computational Description
catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 1 (TAIR:AT1G20630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20620.5

Model type
Protein coding
Short Description
catalase 3
Curator Summary
Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.
Computational Description
catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 9 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR