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11-0622-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1643729 [Map]; Strand: w
      • AT1G05550.3 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0622-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    AGCAGCTCCA AGTCAACCAA AAAATAGAAA ACTAGCTACT GTATTAAGTA 
    TTATGTTATG TAATAAACTA TGTCGTTTGA CTCTCTTCGA TCGGTTTGTT 
    GTGTGACTTT TTTTTTCTGC TTTGTTAACT TATTGNGAGA CCTGTTTTCT 
    AATTTAATAT CTATTATGCT AAGTTATATA TTCTTGTTTT TTTTTNCNNT 
    TTCNAANANG TTTTNGCCAA GNAAGGGGGT NCTNNCCTNC AAAANNAGGG 
    GGNCCNTNAA CCGGGNNCCC CGGNTCCCCN NCCCGGNAAA CNCAAANCAA 
    TTTCCCTTTT NAGTTNNTNN CCCTTTTNTT TAAATTTNAA ACCCCANANT 
    TGGNTGGCTG GTTCNNTTNC NNNCAGGGTT TTNAAATTTN CANGTNCCNN 
    TTTAAANANT AAAAAAATTA AAAAANTAAA ATTTTTTTTC CNGCTTAAAA 
    AAGGGGGAAC CTGGGNGTNG GGANCAAAAA AAAAAAAAAC TTTTGGGGGA 
    AAAAAANCNN NANCCCCAAA GNCAAACCTT TNTTANNAAA ACGNGGGGGN 
    GTTTANCNNN ANCCCTNCCC ATTTTTTTNG GGGNGGGGCC CCCTTGCNNA 
    ANGGGGGNCC CCTGGGNNAG GGGCCCCATT TTNNTTTGGG GATNTTTTNN 
    TNANNCAANG ANTTTCGGGC GGNNAAAAAG TTTTNGGGGA AAACCCCAAC 
    CCNGGNNNGA TTTGNTTTTC CTTTNNAANA AAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1643804 [Map]; Strand: w
      • AT1G05550.3 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0622-1 - 5-prime edge 
    GCTCCACCTC CGCCATCCTG AGGCATCTGC ACAGTGTAGA CCGTCTCCGA 
    AGTCATATTC TGGGAGACGT CAGTAGGAGT CCTCACGATG ATATACTCCA 
    AGAGAGCACT CTTCTTCACG ATGACTATGT ATGTTGTTTG TGTTTGAGTT 
    TAGGTTTAGA TTTTAGATAT CTAGAAGAGG TTTTATATAG GTAATGAGAC 
    GAGAAAGAGG AAGATGTATA ATAAATTTTC ATGGGAGAAA GAGGATGATA 
    ATTCATTTTC AGTTTCCTCT ATTGTTCACT GAAATGCAAA ACAAGCAGAG 
    AGGGCACAGA TTCTATAAGG GTTGAGTAAT GGAATCTTGG GTTAAAAGCC 
    GAGAAAGAGA TGTCTCTGCA TGAAGAAGAA GATGGTGTCG ATGGGGAGAT 
    AGAGAAAGAT ATGAACTGTA ATGCACTATG ACTATAACAT TGGAGATTGT 
    GACCCCACAT CACATGTGCT ATCATAAATT AACTGAGTAA TACACTAATA 
    TGTGTTAGCC TGTTAGGTNT ATAATAGTAA AATCCTCAAG TCATTATATG 
    AAAACCACGT TNTCAAAACC GTAAATGTAA ACTANGGGAA TNTGATCAAA 
    ACAAACTTTN TNANNNTTTT TTAAAATTGG NCTNTTATAA CCNANTCCNT 
    TNTGNGGNCN CNTNGANNAA ANAANAGGNN GATGNNNATN NNAAAAN

AT1G05550.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G05540.1).
Link
InterPro Scan - TAIR