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11-0623-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12561062 [Map]; Strand: w
      • AT4G24200.1 - [+] show detail - Transcription elongation factor (TFIIS) family protein
        Distance: -118; Region: promoter
    Flanking Genome Sequence: 11-0623-1 - 3-prime edge
    ACCATATGGG TGGGTTCTTG TTGACTCACA CAAGTTGGTA CATAATGAGC 
    CGGGCCGTGA GTCCCTACCG ATTCACTCTT CACACGCTTA GCACGTGCAG
    TTTTCATCAA AAAACGCAAA CGAAATTGAG CAAAAAAATA AATATTCACC
    AATCGCTTCA TAAGATTTTT AGTTATTAAA TATTTATTGC CAAAAAGAAT
    AAACGAAGAA AAAGCCTTTT CTTCTCTCTC GTTTTCGCGA CAACCTTTTC
    TTCGAAGAAG AAGAAGAACG AGGTTTTCTC TCAGAGCTGC CAACCATCGT
    TGCCCGGAGA TTTAAAAAAC CTGTGATAAA TCGTAACTGA GTGAGAGATA
    TATACACATA TATATACACA GAGGGACAAG GAAAGAGATT GGGATATGCG
    AGTGCGCATC GGTTCTGTCG GAACGGCTAA CTCGCTTGAC CTAGGGTTTC
    GTCTTCCTTG TGCTTCGTGG TGAGTTCTAT ATTCCTCTCT CTCTTTTTAC
    AATGATGAAT AGCTCTGAAA TTCGCCTAGG GTTTATTAGT GGTATTCATT
    NGGTCATCTG TCTTCAATTT TTTTAATCAC TTTTTGAATT GATCTTTGGA
    ATCTTATTCA TTGAATTNGG CTTAATCTCA TATTATTTGG NCGNATAGTN
    CTCCACATGT GTNGAATTTG GCTAGGTTTT TTCTTCTTTT AATTTTANGG
    TTTNGACCCT GGAACCGGGG ATTTGGN

AT4G24200.1

Model type
Protein coding
Short Description
Transcription elongation factor (TFIIS) family protein
Computational Description
Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink).
Link
InterPro Scan - TAIR