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11-0628-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3199998 [Map]; Strand: c
      • AT1G09840.1 - [+] show detail - shaggy-like protein kinase 41
        Distance: 0; Region: intron1 (5UTR)
      • AT1G09840.2 - [+] show detail - shaggy-like protein kinase 41
        Distance: 0; Region: intron2 (5UTR)
      • AT1G09840.3 - [+] show detail - shaggy-like protein kinase 41
        Distance: -29; Region: promoter
      • AT1G09840.4 - [+] show detail - shaggy-like protein kinase 41
        Distance: 0; Region: intron2 (5UTR)
      • AT1G09840.5 - [+] show detail - shaggy-like protein kinase 41
        Distance: -20; Region: promoter
      • AT1G09840.6 - [+] show detail - shaggy-like protein kinase 41
        Distance: -20; Region: promoter
    Flanking Genome Sequence: 11-0628-1 - 5-prime edge
    GGGATAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATTTC ATATCACTGC GAATCTTTTC CAAAGTTTCG
    CTCTTTATTC TCTCAATGTG CTTTTTCCTG AGTTGTTGTT GAACTAGGGT
    TCTTCTGGGT ACTAGTAACT GTTTTGCTGA TTTTCTGAGC TGCTTTTGGC
    TATAGAATTT CAGTTTTCAA ACCAAACCTT GTCGATTTCA AATCAATCCT
    AGTCGGCAGT AGATCTGATC TGTCTCAATT GGGCTAGATT TTACAGTGTA
    TCAATTCACC ACTAGTTCAA AGTTCATCAG TGCTTACACA AGTTTACTTT
    TTTTTTNGNA NGGGTCCANN ATTAACCTAA NGANCAAAAN NCTNGAAATN
    TAATAATNCN CCTTTNTTNA ANGCAAANGG GCCTNCAAAT TNTNCTAGGA
    AAATCGGNTN TTTGANGGGA NGGGACNCCA AAAAATCCCC AGGGGTTNNN
    AGGCTNTCAA TTNCTAGTAG TNCGGGTTNT NTNCAAANTN TNTNTCATGG
    CATCCTNTGG ACTGGGAAAT GGAGTAGGCN CTTCNAAATC TGCCAAAGGT
    TTAAANAGCT NTTCTANTTC TGNCNATNGG TGGACCAAAA ATTTGGCTGA
    AACAAGGATA AGGGACAAAG TNAAAACCGN TGATGAAANA NNAAGNCTGG
    CNTGGCTNCN NCTTTTTTNA NGNTNATNNA ACGGNTTTTA NCTNNCTTTT
    TTTCCNAANC TNCCANCCCG GGCC
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3200046 [Map]; Strand: c
      • AT1G09840.1 - [+] show detail - shaggy-like protein kinase 41
        Distance: 0; Region: exon1 (5UTR)
      • AT1G09840.2 - [+] show detail - shaggy-like protein kinase 41
        Distance: 0; Region: exon2 (5UTR)
      • AT1G09840.3 - [+] show detail - shaggy-like protein kinase 41
        Distance: -77; Region: promoter
      • AT1G09840.4 - [+] show detail - shaggy-like protein kinase 41
        Distance: 0; Region: exon2 (5UTR)
      • AT1G09840.5 - [+] show detail - shaggy-like protein kinase 41
        Distance: -68; Region: promoter
      • AT1G09840.6 - [+] show detail - shaggy-like protein kinase 41
        Distance: -68; Region: promoter
    Flanking Genome Sequence: 11-0628-1 - 3-prime edge
    TCATATGATT AGGTAGAAGA GTAAAATAAA AAAATGATCA TCACCTNGNG 
    CNGTCGNGAA GANGAACTGA AACCAAAGTC AAGCATTTGA CGATTGTCTT
    CTTCCTCTTT CTTCAATTGA AGAGCTTCAC ATAAATATAT AAAATAGAAT
    ATTTCTCGGT GAATGATCGG ATTGAGAAAA AGGCTAAACC TTTAGATTCT
    TCAAGCGTTA ATTTTGTTTT CCCAACTTCT TCACACCTTC TTTGTCGATT
    TCTATCGTTT TGAATCAAAC GAGAATATGA GACGACAGCT CATCATTATA
    AGCATCATAT ATTAATCTTT TTCTTATATT TATGTTTCTA TAAGATTTTT
    ATTTATGCTT AGTTATATAT TTTTTCCTTC AAAAAATTAA TTAGACCTTG
    TTAAAATTTC ATACTATACT TTTTAATAAG TGTCCCCAAA TATCATAACA
    ACTGGAACTC AATTTTCAAA CCCCAGCCTA CCTAATTTTT GTAACCGGAT
    ATTCAAACTT TTTGGTGTAC AACTTATTTC AACTATAGTG GAAAGTTTAC
    AAAAGAAAAC AACATTTTGT GATTACTAGA AATCGCTTCA AATGTATGTT
    TTTGTCAACA CATTCNAGCC TCCACTCCAA AATGCATCTA TATGGGATTT
    ATATTCTAAT ATGTGCCCTT TGGATTTTTG AGATACGATA AAACAACAAT
    NTATTCTTGG AATTTTCTAG TGATTA

AT1G09840.1

Model type
Protein coding
Short Description
shaggy-like protein kinase 41
Computational Description
shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09840.2

Model type
Protein coding
Short Description
shaggy-like protein kinase 41
Computational Description
shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 103041 Blast hits to 102006 proteins in 3707 species: Archae - 93; Bacteria - 10783; Metazoa - 37541; Fungi - 11720; Plants - 24577; Viruses - 363; Other Eukaryotes - 17964 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09840.3

Model type
Protein coding
Short Description
shaggy-like protein kinase 41
Computational Description
shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09840.4

Model type
Protein coding
Short Description
shaggy-like protein kinase 41
Computational Description
shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09840.5

Model type
Protein coding
Short Description
shaggy-like protein kinase 41
Computational Description
shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09840.6

Model type
Protein coding
Short Description
shaggy-like protein kinase 41
Computational Description
shaggy-like protein kinase 41 (SK41); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 42 (TAIR:AT1G57870.2); Has 102931 Blast hits to 101896 proteins in 3684 species: Archae - 93; Bacteria - 10743; Metazoa - 37496; Fungi - 11700; Plants - 24573; Viruses - 362; Other Eukaryotes - 17964 (source: NCBI BLink).
Link
InterPro Scan - TAIR