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11-0648-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1009013 [Map]; Strand: c
      • AT1G03935.1 - [+] show detail - snoRNA
        Distance: 117; Region: intergenic
      • AT1G03940.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 529; Region: intergenic
    Flanking Genome Sequence: 11-0648-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTAA GAATACAGCT TTTTCGATCA AGAATTATCT 
    GAAGCAGAAC TGGCGTTTCA AGCTGTTACA ATTCATCATC CCAGCCAATC 
    AAAACACAGA AACCCATATA AAAAAAACAA AACCTTTGGC TCATATTAAG 
    AAATCTAACC ATGTATTTAC CGTATCTGCT TCATTGAATA ATCTCAGAAG 
    CGCGGGTAAG TTTATAATCA TTGCCACATA AACAAACGTT GATACCAACT 
    CGATTCCATC AACAAACACA GCTCAAAGCA AAACATACAT AGAAAAGAGA 
    GATATAGACG CTTTTTTGAC ACAGAAAAGC CTAAGGAATA AGGCAAATCT 
    GCAACACAAA CGGCAAAAAT AATCTAGCAG GAGCTTTGGG GCTTACTTCT 
    TCAAGTACAT TAGTTATCAN ATTAGCCCGG GAGGCTCCTG CGAACCACAC 
    TATATATATA TAATCAAACC CTAAAGCGAT TGACGAANAA CCCAAATTCT 
    AAAGATCGAT TCTAATTGTN CGACACAAAG CAGGGAAGAA GATGAGTTAA 
    ATAGCACGCG GNGTGGTCAA AACCCTAGCC TGATTCTCTN TNTGCCAANA 
    AGTCGAAATT GCCCCCGTTA GTTTATTGTT GCGGGTANAC GTTAACCGGC 
    CCCCGTTAGG GTTGNGATGG CTCAAATATG CCCGGNCTTA CAAATTNAAA 
    TTCNTNTGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 875344 [Map]; Strand: w
      • AT1G03495.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 409; Region: intergenic
      • AT1G03502.1 - [+] show detail - snoRNA
        Distance: 14; Region: intergenic
    Flanking Genome Sequence: 11-0648-1 - 3-prime edge 
    ATCCGAGCCT TTCATTGCTA TTTTGTCTTT CTTCTGAGTT ATTATTTCTT 
    GGGAATGTCG ATGAGGATCT AATCCAATCT TACGAGGTGC AGTGGAGCCT 
    GAGACCCTGT TTTACAGGGA GAACCCCTTG GCAGAAGCCT GTAATTTCTT 
    TGACTTCAAT GGATTTTACC TGAGACTTTC TCATTCATTT ATCGCTTTTA 
    TTGAAATCTA TTTGAGTTTA AACTATACAC TTGCACTTGT TTTCTTAGTG 
    CTTGTAGTCT GAAAAAACTC ATAAATTACC AGTGTTCTCA TCAGCTTTGG 
    TCTCCTTAAC CATGAGACTT GAGTTAAACA AGATCACTAC ATTATTCTCT 
    TTCAATTTTA TATTATCTTT TTGTTTTCTT GTTTTGAGTT TCTGTTTTCG 
    GACAAAGAGT ATGTTTTGCC CGTATTTATG AGGTTGGATA TGGATATTAA 
    ACAATATGAA AAGCGTTGGT GGAACGGATA GACTTGTTAT GATTCGTGGG 
    ACTGAACAAC TTCGGTTTTG TGTTGAATCA TTTCNTTGCT ACAAGTTATT 
    GGATGAAAAA GGGGCTGCTA CNTTGCNAAT TNCTNGATCC CCNNNTTGTN 
    NAANNGANNC NNACNCNTCC NNNNNNTTNT TNNNTNNNGN NNNNCNNNNN 
    NA

AT1G03495.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Computational Description
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03940.1); Has 1920 Blast hits to 1905 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1900; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03502.1

Model type
Small nucleolar RNA
Short Description
snoRNA
Curator Summary
small nucleolar RNA
Computational Description
snoRNA
Link
InterPro Scan - TAIR

AT1G03935.1

Model type
Small nucleolar RNA
Short Description
snoRNA
Computational Description
snoRNA
Link
InterPro Scan - TAIR

AT1G03940.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Computational Description
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03495.1); Has 1873 Blast hits to 1858 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1853; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR