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11-0675-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3111287 [Map]; Strand: c
      • AT1G09600.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon7 (CDS)
      • AT1G09610.1 - [+] show detail - Protein of unknown function (DUF579)
        Distance: -407; Region: promoter
    Flanking Genome Sequence: 11-0675-1 - 5-prime edge
    CCCAAAAGTT TCTTNCTNTC TTATCCTTTC CTGATATATC TCACCTGCCA 
    TTTGCAGCAA GAAACGCTGG AGTCTGTCTG TATATCAGCC TCTATTCGTC
    TTCTTATCCA CCCGGAGCGT TTGCGAACCG CTAACTTGAA TCTGCCTTTC
    ATGTTCTTTC AACATTTCAT CTAAGTTTCC TCCTGCAGAA ACCAAAGGCC
    CTGAGCAGTG CATTCTCTCT TTCTTTTCAC CGTTAACCTA AAGATAACCA
    TACAAATTGT GATTAGCCCA CAAAGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3111403 [Map]; Strand: c
      • AT1G09610.1 - [+] show detail - Protein of unknown function (DUF579)
        Distance: -291; Region: promoter
    Flanking Genome Sequence: 11-0675-1 - 3-prime edge
    CTTTTGGGAT ATCAGACAAA AAGAGAAAGA AAGTGTTGCG GTTTTGCAAT 
    GTAGAGTCGA CTGATCTCTG GTGGGGTCTT GTATGATATT TGTGTATTTT
    GTTTATTCTT CATTCTTGTA TGATATTAAG ATTTATTAGT CCTAGTAGAA
    TCAATCATTA TTGTTATTTT GGTATTTCAA TTGCACTAAA CGGTCTAACA
    GAGACAAATA TCGATCCAAC TACCAAGAAA CTTAAATAGA AGGCTTCACT
    CTCTTGCTTC TTTTTGCAGA ACCTGAAATT AGCTGCAATG TCTTCTTCAA
    GTACCCTTAT AGCTTCTTTT GCTTCATGTC TACGCATAAA CCCAACTTCC
    TCTCTTATCT CAGCATTTCT TTATATAGTT ATTTAGGAAC AAGTCGTAAC
    TTCTGTAGAA TT

AT1G09600.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G57700.1); Has 123498 Blast hits to 122030 proteins in 4353 species: Archae - 93; Bacteria - 13546; Metazoa - 45885; Fungi - 12568; Plants - 30937; Viruses - 467; Other Eukaryotes - 20002 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09610.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF579)
Computational Description
Protein of unknown function (DUF579); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT4G09990.1); Has 252 Blast hits to 251 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 240; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR