1. Home
  2. Mutant Lines
  3. 11-0695-1

11-0695-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28963983 [Map]; Strand: c
      • AT1G77093.1 - [+] show detail - Defensin-like (DEFL) family protein
        Distance: 834; Region: intergenic
      • AT1G77095.1 - [+] show detail - transposable element gene
        Distance: 33; Region: intergenic
    Flanking Genome Sequence: 11-0695-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGT 
    CCCGCAAGTT CTGCCTTAAG GTTATGTGCA TTTACGTTCA AGAATATACA 
    AATCTATCTT TGTTGCAGGA TTGTGAAGTT GTGTATTGAA ATATGCGATC 
    ACATCCTGTA TCTGAGTTTT TGACGTACTT CCCACTAACT CTGCAATCCC 
    ATCAAGTCTA ATTCCTTTAT TCATTGTCAC TTTCCCAACA GTTAAAGCAA 
    GATTCACAAC AACATGCTTA GCTTTTTCTG GTGGTATAAC ACTCTTCTGT 
    TTATGCTTGA AACCACTTCG ATGGCCGTGT ATCTTATAGC AGGTGTCAGC 
    GTTGTGTCCA GTGTAGCCGC AATGAGAACA TTGAACTTTT GGCTTTGAAT 
    TAGCAGGAAA TAACCTGGTC GCATTCACGG CAAACTGATC ATTATGTGAA 
    ACCGAAATGT TGAATGTGGA AGCATTGGTT GGTACTGTGA CAATGTTGCA 
    TTGACTGTGA TAAAAAGGTT GTAAATCTCT GCCAGGTCCG AATAGTTGAG 
    TAAGAATCAT TCAGGCCTGA GAGAAACTTA AAAATCTTGG CATGCTTGGC 
    AACAGAGTAA GTAGCAGTAC AACATTTGCA ATTTTGGCAA GTATTGACAC 
    AACTAGCTCC ATCCAAGTCA TCCCACAGAT TCTTCAATGC GGTGTAGTGC 
    ACTTCGACCT AAGGACTTGG TTGTCGAATT GGAATTTCCC GTCCCAATCC 
    ANAGGAATCT TGAAGCACAC GTAACCGCCT CNAGGC

AT1G77093.1

Model type
Protein coding
Short Description
Defensin-like (DEFL) family protein
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
Defensin-like (DEFL) family protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Defensin-like (DEFL) family protein (TAIR:AT1G76954.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G77095.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 9.8e-14 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR