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11-0696-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26093328 [Map]; Strand: w
      • AT1G69420.2 - [+] show detail - DHHC-type zinc finger family protein
        Distance: 0; Region: intron1 (5UTR)
      • AT1G69420.1 - [+] show detail - DHHC-type zinc finger family protein
        Distance: -10; Region: promoter
    Flanking Genome Sequence: 11-0696-1 - 5-prime edge
    ATTTATTGGC CATAGGAAAA AGGTAACTGC TTTTTCATCT CTTAATTATA 
    ACTCCTCTCC TCTCTTCTCT CTCTCTCTTC CATGGTGCGT GGTGGGTTCT
    TCTTTTAGTA GATC
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26093259 [Map]; Strand: w
      • AT1G69420.2 - [+] show detail - DHHC-type zinc finger family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G69420.1 - [+] show detail - DHHC-type zinc finger family protein
        Distance: -79; Region: promoter
    Flanking Genome Sequence: 11-0696-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    NAGNGTNACA CGNCCGNNNN NGNCCTATNC AGTCCACTGA GCGTGCTNTC
    TCCTTTGGNA AATGAGCAAT CACTCTTNTN TGTCTGTCTC TCTTNCTCGA
    ANTANNNAAC NCTCTTTNGC TTTTACACCC CCNGAGATNT TTGNTGCCTN
    CTATGTGCTT CACNNTAAAA NTTTGNANAC TTNAAATCCC ACATGANNTG
    TCTCAANGNG GNGAGATANN ATGAGNAANA NTAGGTTNAA NAGGGATTAN
    GNANNNTAAA CATGTCTNTA TNNAACTGAA NGACNATGTG NNCNTGTGTA
    ATANATTGTC TGATNCTCAC ACATGAANTG TTGTGNTGCA CCAAANGANT
    ATTNTGTNAT ANATGTCGAG TCTTCCAAAC GGGGAANTAC TNTGCACAAA
    GTTCAAATAT GTNACAANAA TCANAGCNGA TTTGGTTAAA GANAATTGAG
    AACTCCCAAA GANTTTNTTT AAGNGAANGG AATATTATAG AANCANCTNT
    TGATTNCNAA TATGNGAGGG CTCGAAN

AT1G69420.1

Model type
Protein coding
Short Description
DHHC-type zinc finger family protein
Computational Description
DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 4875 Blast hits to 4868 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2148; Fungi - 657; Plants - 848; Viruses - 0; Other Eukaryotes - 1222 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G69420.2

Model type
Protein coding
Short Description
DHHC-type zinc finger family protein
Computational Description
DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G15080.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR