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11-0712-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22770725 [Map]; Strand: c
      • AT3G61520.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0712-1 - 5-prime edge 
    NNTNGGCCGT ATGGGCNTGG TGANTCACCT CGGNTCTTGT ATACNANAGA 
    CTCAGATCTC GGAATNTGAA ANACTCCCNG GNNCGTAATG TTGTGGTAGA 
    CAGTCTTGCC TAAGAAATGG ACTTTGTGGA TGATGCCTTC AAGGTGCTCG 
    ACGAAATGCT TCAGAAAGAA TCTGTTTTTC CTCCTAATAG AATCACATCG 
    GATATTGTGT TACACGAGGT TTGGAAGGGC AGGCTTTTGA CAGAAGAAAA 
    GATAATTGCT TTGATTTCAA GATTTAGCTC TCATGGTGTC TCCCCAAACT 
    CTGTTTGGTT GACTCGGTTT ATATCAAGTC TATGCAAAAA TGCTCGCGCC 
    AATGCTGCTT GGGATATTTT GAGCGACCTG ATGAAGAACA AAACCCCACT 
    TGAAGCTCCT CCCTTCAATG CGCTTTTGTC TTGCTTAGGA AGGAATATGG 
    ACATTAGTAG AATGACTGAT TTAGTCTTGA AGATGGATGA GGTGAAAATC 
    CGGCCTGATG TTGTGACTTT AGGGATTCTT ATTAACACTT TATGCAAATC 
    AAGAAGGGTA GATGAAGCTC TCGAAGTTTT TGAACAAATG CGTGGAAAGA 
    GAACTGATGA TGGAAATGTG ATTAAAGCTG ATTCGATTCA TTTTAATACT 
    CTCATTGACG GGCTCTGCAA GGTGGGGAGG TTGAAANAAN CNNAGGAGTT 
    ATTGGTAAGG AT

AT3G61520.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G28460.1); Has 51879 Blast hits to 14395 proteins in 309 species: Archae - 5; Bacteria - 71; Metazoa - 859; Fungi - 887; Plants - 48189; Viruses - 0; Other Eukaryotes - 1868 (source: NCBI BLink).
Link
InterPro Scan - TAIR