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11-0719-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2163954 [Map]; Strand: c
      • AT3G06860.1 - [+] show detail - multifunctional protein 2
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 11-0719-1 - 3-prime edge
    GTATGGACAG GTTCCTGGAG TTACTGATCG TGGGTTGGTG CCAAGGAAGA 
    TTAAGAAGGT AGCCATAATT GGAGGCGGGT TGATGGGATC TGGAATAGCT
    ACTGCGTTGA TCCTAAGTAA CTATCCAGTG ATTCTCAAGG AGGTAAATGA
    GAAATTCCTG GAGGCTGGAA TTGGCAGAGT TAAAGGTGAG GGTGGAGTTC
    CATACATTGC ATACCAATGA ATTGCAATAG CTTGATCTGA CTAATTTCAT
    AATTGGATCA GCTAATCTCC AGAGCCGTGT AAGGAAGGGA AGCATGTCTC
    AGGAAAAGTT TGAGAAAACC ATGTCTCTCC TTAAGGGTTC TCTTGATTAT
    GAAAGCT

AT3G06860.1

Model type
Protein coding
Short Description
multifunctional protein 2
Curator Summary
Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.
Computational Description
multifunctional protein 2 (MFP2); FUNCTIONS IN: enoyl-CoA hydratase activity, 3-hydroxyacyl-CoA dehydrogenase activity; INVOLVED IN: fatty acid beta-oxidation; LOCATED IN: nucleolus, cell wall, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Enoyl-CoA hydratase/isomerase, conserved site (InterPro:IPR018376), 3-hydroxyacyl-CoA dehydrogenase, conserved site (InterPro:IPR006180), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), NAD(P)-binding domain (InterPro:IPR016040), 3-hydroxyacyl-CoA dehydrogenase, NAD binding (InterPro:IPR006176), Crotonase, core (InterPro:IPR001753), 3-hydroxyacyl-CoA dehydrogenase, C-terminal (InterPro:IPR006108); BEST Arabidopsis thaliana protein match is: Enoyl-CoA hydratase/isomerase family (TAIR:AT4G29010.1); Has 46309 Blast hits to 45272 proteins in 2450 species: Archae - 810; Bacteria - 29664; Metazoa - 2011; Fungi - 1039; Plants - 666; Viruses - 0; Other Eukaryotes - 12119 (source: NCBI BLink).
Link
InterPro Scan - TAIR