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11-0742-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1223922 [Map]; Strand: w
      • AT1G04500.1 - [+] show detail - CCT motif family protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G04501.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -630; Region: promoter
    Flanking Genome Sequence: 11-0742-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAA TGAAGCAATT TGACAAAAGA TAAAATCGAA 
    TAACTAAGAA AATTAAGAAA ACGATGTTAC CTACAAAATA CAAAGATTTC 
    AGAAAATAAT TTTATTCCTT GCGAATAAAT CATAGATATA TACATGCAAA 
    ATTTTCAGGA AAAAAAGTTC ATGCTTTTTA ATCATTTAAG CAATGTATGA 
    TAGAAAAGAG GAAACCCAAA GAAGAGAAAC CATTCAAGGG CATAAAAACA 
    GATTCGAGGA CAAACAATAA ACATTGCACG GATTATTACG TACCATGGAG 
    AGCTGCTCAT GAGACGAAAT TACGTCCTGC GACATGTTTA TGTGTTCTTT 
    ATGGTCTCCA AATTGTGAAT GATTTTCCGG GAATGAATCC AGAGAGAAAA 
    TTCCCCAGGA AAAGGGAAAG ATTATTGAAG GAGGCTTCTT GAATGTGGTA 
    GTGGAGCTAG TGATGTCTGA ACAAGAAAAT CTAAAGAATT AAAATACTGG 
    AACAAAAGAG ATAATAATTA ATCAAACAGA ACAGAATAAA AATCTGTTTA 
    AAGACAGAGA AGAGAAGAAA TTTCTTACAG GTTTCTTCTG GAGAAACTAA 
    TGAAGGTTAT GGAAGTTATC GTAACCAATT TATTTATACT TATGGTTTAA 
    ATGTGTATCT ATATGTGTAT GTATGCNAAA TGTAATAAGA AAAATGCCAG 
    CGTGGCAATT GACGTTAACG CGCTGGTCCT GGAGTTTCTT ATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1223927 [Map]; Strand: w
      • AT1G04500.1 - [+] show detail - CCT motif family protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G04501.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -625; Region: promoter
    Flanking Genome Sequence: 11-0742-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    ATTTTTTATT TCCTTTTACT TTCTTTTCTG TTTCTGGTTA TTCTAGATAC 
    AATTCAGTTC ATATTCCAAA AGTCTGAAAC GATAATTAGT AAAGCAAACT 
    TTTTAGTGCT AACTCTTTTG TACGGTGTTC ATACNGTAGT TACNGTACCT 
    TTCTCGCTAG CCAACCACAA ATCGTCACAA TACTTAATCA GATAGAATAG 
    AACAGTTTAT CAGAATT

AT1G04500.1

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04501.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR