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Mutant Lines
11-0792-1

11-0792-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 17925680 [Map]; Strand: w
- AT4G38220.1 - [+] show detail - Peptidase M20/M25/M40 family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G38220.2 - [+] show detail - Peptidase M20/M25/M40 family protein
  Distance: 0; Region: exon1 (CDS)

GTGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCNTNN TCCCNNGCCT GCTACCANCC ANTGCCCATA TNGTCTATCT 
CTCCTTCGTC CCCGATGAAG AGATTGGCGG CCACGATGGC GCAGAGAAGT 
TTGCTGAATC CCAATTATTC AAGAGCTTGA ACATCGCAAT CGTGCTCGAC 
GAAGGTAAAC ACTCTTCTGG ATTTGATTCT TGATTATAAC AGCCAAGCAT 
CATCTTATAC AACAAAGTGA ATCAGGCCTG CCATCGCCTA CTGAGAGTTA 
CAGAGTATTC TATGGAGAGA GGAGTCCCTG GTGGCTGGTG ATTAAGGCTA 
AAGGTCCACC TGGCCACGGT GCCAAGCTCT ATGACAACTC TGCCATGGAG 
AATCTGCTCA AAAGCATTGA GAGTATTCGC AGATTCAGAG CTTCTCAGTT 
CGATCTTCTC AAAGCTGGTG GGATAGCTGA AGGCGATGTT GTCTCTGTGA 
ACATGGCCTT CCTCAAGGCT GGCACACCTT CTCCAACTGT AACTACTTTT 
TTCTTCATTC ATATTATGTA TGATTCCAAA GTTGATGTCT TTATCTGAGA 
ATCTGGCTCT TTCTTTATCC TCAAGGGTTT CGTAATGAAT CTGCAACCAT 
CTGAGGCAGA AGCTGGTTTC GACATTCGTG TTCCACCCAG CGTTGATGCT 
GAAGCACTCG AAAGACGTTT AGTGGAGGAA TGGGCTCCAG CAGCACGAAA 
CATGTCCTTT GAGGTAATTT CTTGGCCACC TGTATCTCTT TCT

3 prime edge [+] show sequence

Chromosome: 4; Position: 17925637 [Map]; Strand: w
- AT4G38220.1 - [+] show detail - Peptidase M20/M25/M40 family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G38220.2 - [+] show detail - Peptidase M20/M25/M40 family protein
  Distance: 0; Region: exon1 (CDS)

GCTTGAAGCC AGAAGCCTGG AGCTTGCGTA TGGCCTCGAG GTACTGCATC 
CCGACGCACT TCATGTCCTG GGAACCCCTG GCATAGATGT CGCCATGGTG 
GTCCATGTGA GCTTGGAGCG GATGGTGAGT CCACTTGGAG TCCTCGAAGG 
GAACGACATC GGTGTGGGAG TTGAGGAGAA AGGCAGGTAG GGTTGGGTCG 
GAGCCAACCC ATTTGAGGAG GAGAAGCGGC TTTCCTTTTA CAAATTCGAT 
CGTCTGAGAT TCGAGGGACA GTGGTTTCGC CTGAGATATT ATAAAGTCAA 
CGGCTTTGTA GTATTCCGGG TTGGGCTGAA CCGTGTTGAT TCGGAGGTAC 
TCCTGGAATC TGGAGACGAT GGCGTCGTCG CCGGCCACCG CAGAAAGATG 
AAGAACAACA ACAACGAGGA GAAGACGAAG AAGACTCATT GAATTGGATT 
CGGATTCTTC TGCAACAACA ACAACAACTA CTTCCACTAC AGAGCAGCAA 
ATGGATTACT AAATTGAATT GCTCACAAAA GGGATGAAGA AGGCCACGTG 
GCAGAAAGGA ATGGCAGTTT GGTGAATAAA TGAAATAACA AGGGCAAAAG 
AAAGAAAAAC CAAACTAATT GTAACCATAA TCCCTACACT CACTCACTTG 
TGGATCTCGA GAGAGATGAT NGAGGANTGC ANTATGAGGA AACTGGCCTT 
GNGGCNCACN ANACCTTCAA GCCTGTTATG ACNCACGANG AG

AT4G38220.1

Model type: Protein coding
Short Description: Peptidase M20/M25/M40 family protein
Computational Description: Peptidase M20/M25/M40 family protein; FUNCTIONS IN: metallopeptidase activity, hydrolase activity, aminoacylase activity; INVOLVED IN: response to zinc ion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 7635 Blast hits to 7629 proteins in 1864 species: Archae - 183; Bacteria - 5555; Metazoa - 388; Fungi - 290; Plants - 78; Viruses - 2; Other Eukaryotes - 1139 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38220.2

Model type: Protein coding
Short Description: Peptidase M20/M25/M40 family protein
Computational Description: Peptidase M20/M25/M40 family protein; FUNCTIONS IN: hydrolase activity, metallopeptidase activity, aminoacylase activity; INVOLVED IN: response to zinc ion; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ArgE/DapE/ACY1/CPG2/YscS, conserved site (InterPro:IPR001261), Peptidase M20 (InterPro:IPR002933), N-acyl-L-amino-acid amidohydrolase (InterPro:IPR010159), Peptidase M20, dimerisation (InterPro:IPR011650); BEST Arabidopsis thaliana protein match is: Peptidase M20/M25/M40 family protein (TAIR:AT1G44820.1); Has 7219 Blast hits to 7215 proteins in 1775 species: Archae - 179; Bacteria - 5225; Metazoa - 384; Fungi - 290; Plants - 80; Viruses - 2; Other Eukaryotes - 1059 (source: NCBI BLink).
Link: InterPro Scan - TAIR