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11-0890-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2716714 [Map]; Strand: c
      • AT1G08580.1 - [+] show detail - unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; ...
        Distance: -310; Region: promoter
    Flanking Genome Sequence: 11-0890-1 - 5-prime edge
    CATGCATTAA TTATTAATTA TATGTATATA TACTAATGAT GAGATCATAA 
    TTTCGATAGT TTAGAGAGAA GATGAGGCTG GAGAGCATGT GCTAAGAGCT
    TTCCATTAAC CATCTAAACA CNTTAAATCT AATTAGTTTA GCCACATTTT
    GTTTTTTTGT AATTAAATTT CACATTTTTT TTATTTAAAG AAGAAGTTCA
    GATTTCAATA ATTTGACGTC TTTCAATTTG AGCCGAATCA AACCGAACCG
    GATTAATTGT TATTTTTCTC AAGCAGCAAC GATAAAAAAG ATATCTAAAA
    GGCCCAAATA AGAAATTGAG AAAAGGCCCA AATAGAATTC GTGCGACTGT
    GGAATTTAGG GTTTTGCATC GAAGTTGGTT TTTAGGTATT AAGTGAGCGA
    GGCGTCGAAG CTAGGGGTTT GGGTAGAGTA GTAAGATGGC CAAGTACAAC
    GAGATTGCGA AGAAGAAGAG AGAGGCTAAA GCCGATAGAA AACGAGCCAT
    TCACGGCGAT CCTCTCACCA ATAAATTGAA GACCAGAACT CCGGTCCCCT
    CCGTCTCCGG CAAACGTCAG AGAAAGCTCC TTCGCAAATG GCGCAGAGTA
    TGTAATTCCT TGATTTAATT GGTTTATTCT AAGATGGAGA ATCACACTAG
    GTCATAGTCC TATGTGGGTT CATGTCTTTT GAGTAGTATA TAAGCTTTTG
    AATGCATTAN AG
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2716787 [Map]; Strand: c
      • AT1G08580.1 - [+] show detail - unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; ...
        Distance: -383; Region: promoter
    Flanking Genome Sequence: 11-0890-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGATTATCAT TCACATATAG GATGTATTGT TGTTATTCCA TTCGGTATTT
    TATATTTTAA AATGTTGATT ATGATAAAAA GTCCCATATG GGTGCATGTG
    AAATATGAAA GGGCATATTA TAAAGTTAGA TTTGAGCAAT TATTTTTTCC
    TTCTTATGAA TATGATAATA GAGGATAAAT TTGAAAGGAC AAAGAACTTT
    AATTAGAGGT GCTGTCCATA TCTACCTTGC AAACCTACAA CAATTAAATG
    TGTTGGACGA ACCGATAGTC GATACTCGAT AGTCGATAAT GGATATATAT
    GCTCGA

AT1G08580.1

Model type
Protein coding
Computational Description
unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR