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11-0902-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2713039 [Map]; Strand: w
      • AT3G08920.1 - [+] show detail - Rhodanese/Cell cycle control phosphatase superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G08930.1 - [+] show detail - LMBR1-like membrane protein
        Distance: -359; Region: promoter
    Flanking Genome Sequence: 11-0902-1 - 3-prime edge 
    GTAACAGTNC AAGTAGTTTG AGTAAATAAA ATGATACACC TCCTATCGTG 
    GCGAACCGAA GCTCTTCGGN CCCTTCGATC TCTGGAAAAT CTCCCTCGGA 
    TACTCGGNTA AACCCTCCGG TTAACCACCC TAAGCGTACN AGCGNCNGGG 
    CCAGNNGACC ACGGCGNGCC CTANNCAACG AACTNGCGGA TC

AT3G08920.1

Model type
Protein coding
Short Description
Rhodanese/Cell cycle control phosphatase superfamily protein
Computational Description
Rhodanese/Cell cycle control phosphatase superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G42220.1); Has 237 Blast hits to 237 proteins in 53 species: Archae - 0; Bacteria - 52; Metazoa - 3; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G08930.1

Model type
Protein coding
Short Description
LMBR1-like membrane protein
Computational Description
LMBR1-like membrane protein; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LMBR1-like membrane protein, conserved region (InterPro:IPR006876); BEST Arabidopsis thaliana protein match is: LMBR1-like membrane protein (TAIR:AT5G01460.1); Has 384 Blast hits to 384 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 85; Plants - 80; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
Link
InterPro Scan - TAIR